Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1o18
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   2.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   3.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   3.6  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   3.6  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   3.6  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    22   4.8  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    22   4.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   6.3  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   8.4  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 339 SLTSGNWKGANTLPSKCFLYCVHRHF 262
           ++ +G W     L  KC++YC+   F
Sbjct: 57  AVRNGQWPETRQL--KCYMYCLWEQF 80


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 41  VIFL*KYFYFYME 79
           +++L KYFY +ME
Sbjct: 532 MVYLQKYFYLFME 544


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 41  VIFL*KYFYFYME 79
           +++L KYFY +ME
Sbjct: 532 MVYLQKYFYLFME 544


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 380 ESIHRRTKYGFKLKP 424
           E + RR +Y F+LKP
Sbjct: 50  EGLGRRHRYNFQLKP 64


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 380 ESIHRRTKYGFKLKP 424
           E + RR +Y F+LKP
Sbjct: 51  EGLGRRHRYNFQLKP 65


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 248 DNELLKCRWTQYKK 289
           +N++L   WT YKK
Sbjct: 97  NNQILHILWTSYKK 110


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 248 DNELLKCRWTQYKK 289
           +N++L   WT YKK
Sbjct: 80  NNQILHILWTSYKK 93


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 356 SCRSEDLSRRETGRAQTPYPPNVSCTVSI 270
           +C   +L      R QTP+ P+V   + I
Sbjct: 761 ACNRSELVEAILKRVQTPFDPDVPIELQI 789


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 377 SESIHRRTKYGFKLKPG 427
           +ESI    K GFKLK G
Sbjct: 344 AESILEPAKKGFKLKQG 360


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 371  LPSESIHRRTKYGFKLKPGP 430
            LPS+ ++ +T +G K+ P P
Sbjct: 1243 LPSQLLNIKTLHGLKVIPTP 1262


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +2

Query: 281 YKKHLEGRVFAPFQFPDVRDLHFYNCAIRFLPSESIHRRTKYGFKLKPGPGV 436
           +KK  E ++F P + P ++++           SE + + T  GF L+P  G+
Sbjct: 263 FKKMQEEKIFEPHRIPQLQEV-----------SEFLKKNT--GFTLRPAAGL 301


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,406
Number of Sequences: 438
Number of extensions: 3332
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)