Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1o17
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ418878-1|ABD77422.1| 1765|Drosophila melanogaster echinus spli...    29   8.5  
DQ418877-1|ABD77421.1| 1746|Drosophila melanogaster echinus spli...    29   8.5  
AY576488-1|AAS86754.1| 1712|Drosophila melanogaster echinus prot...    29   8.5  
AL031130-3|CAA20016.1| 1761|Drosophila melanogaster EG:EG0002.3 ...    29   8.5  
AE014298-564|AAF45898.2| 1712|Drosophila melanogaster CG2904-PA ...    29   8.5  
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA...    29   8.5  

>DQ418878-1|ABD77422.1| 1765|Drosophila melanogaster echinus splice
           form 3 protein.
          Length = 1765

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 707 SPDRGDSCAESACPCH 660
           SPD GDSC  SAC  H
Sbjct: 200 SPDDGDSCESSACIAH 215


>DQ418877-1|ABD77421.1| 1746|Drosophila melanogaster echinus splice
           form 1 protein.
          Length = 1746

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 707 SPDRGDSCAESACPCH 660
           SPD GDSC  SAC  H
Sbjct: 181 SPDDGDSCESSACIAH 196


>AY576488-1|AAS86754.1| 1712|Drosophila melanogaster echinus
           protein.
          Length = 1712

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 707 SPDRGDSCAESACPCH 660
           SPD GDSC  SAC  H
Sbjct: 147 SPDDGDSCESSACIAH 162


>AL031130-3|CAA20016.1| 1761|Drosophila melanogaster EG:EG0002.3
           protein.
          Length = 1761

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 707 SPDRGDSCAESACPCH 660
           SPD GDSC  SAC  H
Sbjct: 196 SPDDGDSCESSACIAH 211


>AE014298-564|AAF45898.2| 1712|Drosophila melanogaster CG2904-PA
           protein.
          Length = 1712

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 707 SPDRGDSCAESACPCH 660
           SPD GDSC  SAC  H
Sbjct: 147 SPDDGDSCESSACIAH 162


>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
           protein.
          Length = 1998

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 612 DKLFISVSGSEVTRCYVTRTGAFCAGVATVG 704
           D+  +  S SE++RCYV+ T +   G+   G
Sbjct: 823 DRDLLGASDSELSRCYVSETSSLTGGLTAGG 853


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,460,782
Number of Sequences: 53049
Number of extensions: 643405
Number of successful extensions: 1292
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)