Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1o13
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 68 9e-12
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 68 9e-12
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 63 2e-10
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 59 4e-09
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 58 5e-09
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 58 5e-09
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 58 5e-09
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 58 7e-09
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 58 7e-09
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 53 3e-07
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 53 3e-07
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 47 2e-05
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 35 0.073
Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical pr... 30 1.6
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical ... 30 1.6
AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF tra... 30 1.6
Z92973-1|CAB07493.2| 323|Caenorhabditis elegans Hypothetical pr... 28 6.4
U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical pr... 28 6.4
U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70287-10|CAA94299.2| 339|Caenorhabditis elegans Hypothetical p... 28 8.4
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 28 8.4
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 67.7 bits (158), Expect = 9e-12
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = +1
Query: 532 WTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKIS---NSNANNASVWLD 702
+ Y+ L+ I + + L+ ++P++ T IG+S E R L ++KI+ N + S+W+D
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWID 184
Query: 703 AGIHAREWIAPAVATYIA 756
AGIHAREWIAPA A YIA
Sbjct: 185 AGIHAREWIAPATAMYIA 202
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 67.7 bits (158), Expect = 9e-12
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = +1
Query: 532 WTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKIS---NSNANNASVWLD 702
+ Y+ L+ I + + L+ ++P++ T IG+S E R L ++KI+ N + S+W+D
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWID 184
Query: 703 AGIHAREWIAPAVATYIA 756
AGIHAREWIAPA A YIA
Sbjct: 185 AGIHAREWIAPATAMYIA 202
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +1
Query: 475 KIHEDIKKDEENGLRLRMDWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKL 654
K+ + ++ + +++ + YH + ++++ L +P + + IG + EGR + L
Sbjct: 103 KLRKQVRLHDWREQKVQFNLAQYHSFADVINYLNSLAITYPELVSVQPIGTTHEGRQIPL 162
Query: 655 LKISN--SNANNASVWLDAGIHAREWIAPAVATY 750
+KI+N + +W+D GIHAREW++P+ Y
Sbjct: 163 IKITNKRNGGTKRGIWVDGGIHAREWVSPSTVLY 196
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 535 TNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNSNANNASVWLDAGIH 714
T Y D F++ L +P+ IG S EGR + ++I++ ++ VW+DAGIH
Sbjct: 117 TRYLSYDEQMKFLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIH 176
Query: 715 AREWIAPAVATYI 753
AREWI+ VA Y+
Sbjct: 177 AREWISYNVALYL 189
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 535 TNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNSNANNASVWLDAGIH 714
T Y D F++ L +P+ IG S EGR + ++I++ ++ VW+DAGIH
Sbjct: 117 TRYLSYDEQMKFLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIH 176
Query: 715 AREWIAPAVATYI 753
AREWI+ VA Y+
Sbjct: 177 AREWISYNVALYL 189
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/99 (30%), Positives = 51/99 (51%)
Frame = +1
Query: 469 LVKIHEDIKKDEENGLRLRMDWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDL 648
L ++H+D+ G R+ Y+ V+ ++++ + + P I +G ++EGRD+
Sbjct: 78 LKRLHDDV------GFHSRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDI 131
Query: 649 KLLKISNSNANNASVWLDAGIHAREWIAPAVATYIADYI 765
LK + V +DAGIHAREW A A+Y + I
Sbjct: 132 LGLKFGKDTPDKKIVVIDAGIHAREWAAIHTASYFINLI 170
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/99 (30%), Positives = 51/99 (51%)
Frame = +1
Query: 469 LVKIHEDIKKDEENGLRLRMDWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDL 648
L ++H+D+ G R+ Y+ V+ ++++ + + P I +G ++EGRD+
Sbjct: 78 LKRLHDDV------GFHSRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDI 131
Query: 649 KLLKISNSNANNASVWLDAGIHAREWIAPAVATYIADYI 765
LK + V +DAGIHAREW A A+Y + I
Sbjct: 132 LGLKFGKDTPDKKIVVIDAGIHAREWAAIHTASYFINLI 170
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/99 (30%), Positives = 51/99 (51%)
Frame = +1
Query: 469 LVKIHEDIKKDEENGLRLRMDWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDL 648
L ++H+D+ G R+ Y+ V+ ++++ + + P I +G ++EGRD+
Sbjct: 78 LKRLHDDV------GFHSRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDI 131
Query: 649 KLLKISNSNANNASVWLDAGIHAREWIAPAVATYIADYI 765
LK + V +DAGIHAREW A A+Y + I
Sbjct: 132 LGLKFGKDTPDKKIVVIDAGIHAREWAAIHTASYFINLI 170
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 58.0 bits (134), Expect = 7e-09
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 505 ENGLRLRMDWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNSNANN 684
E G R R + YH I ++ D+E +P F +G + EGR ++ +KI + N
Sbjct: 129 EGGNRARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRN 188
Query: 685 AS--VWLDAGIHAREWIAPAVATYIAD 759
W+D GIHAREW A A + D
Sbjct: 189 DKRIFWIDGGIHAREWAAVHTALWFID 215
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 58.0 bits (134), Expect = 7e-09
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 505 ENGLRLRMDWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNSNANN 684
E G R R + YH I ++ D+E +P F +G + EGR ++ +KI + N
Sbjct: 129 EGGNRARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRN 188
Query: 685 AS--VWLDAGIHAREWIAPAVATYIAD 759
W+D GIHAREW A A + D
Sbjct: 189 DKRIFWIDGGIHAREWAAVHTALWFID 215
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 529 DWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNSNANNASVWLDAG 708
D+ Y + ++ L +P + IGK+ EGR++ ++I + W+D G
Sbjct: 124 DFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKIFWIDGG 183
Query: 709 IHAREWIAPAVATYIADYIT 768
IHAREW AP A + +T
Sbjct: 184 IHAREWAAPHTALFFIHQLT 203
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 529 DWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNSNANNASVWLDAG 708
D+ Y + ++ L +P + IGK+ EGR++ ++I + W+D G
Sbjct: 124 DFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKIFWIDGG 183
Query: 709 IHAREWIAPAVATYIADYIT 768
IHAREW AP A + +T
Sbjct: 184 IHAREWAAPHTALFFIHQLT 203
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +1
Query: 529 DWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKI-SNSNANNASVWLDA 705
D+ +Y D++ ++ +EF +P I IG + EG+ ++ LKI + S+ +VW+D
Sbjct: 160 DYASY--ADMV-KYMRTIEFYYPRIAKIVRIGATHEGKPIEGLKIGARSSHKKRAVWVDG 216
Query: 706 GIHAREWIAPAVATYIADYI 765
IHAREW + A Y + +
Sbjct: 217 NIHAREWASSHTALYFINQL 236
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 496 KDEENGLRLRM-DWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNS 672
+D G R D T Y+ +I + D PS IG++ EGR L ++I
Sbjct: 19 RDVNGGARTPFFDLTVYNDWPQFEDYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKP 78
Query: 673 ---NANNASVWLDAGIHAREWIAPAVATYIAD 759
+VWLD G HAREW A VA Y +
Sbjct: 79 ALPGKRKIAVWLDGGNHAREWPAFHVAVYFIE 110
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 496 KDEENGLRLRM-DWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNS 672
+D G R D T Y+ +I + D PS IG++ EGR L ++I
Sbjct: 19 RDVNGGARTPFFDLTVYNDWPQFEDYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKP 78
Query: 673 ---NANNASVWLDAGIHAREWIAPAVATYIAD 759
+VWLD G HAREW A VA Y +
Sbjct: 79 ALPGKRKIAVWLDGGNHAREWPAFHVAVYFIE 110
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1
Query: 529 DWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKI---SNSNANNASVWL 699
D YH + + F+ L + + S EGR + +KI S S+ +
Sbjct: 143 DTNAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVKIHPPGPSPPEKPSIIV 202
Query: 700 DAGIHAREWIAPAVATYI 753
DAG+HAREWIAPAV ++
Sbjct: 203 DAGVHAREWIAPAVGLFM 220
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +1
Query: 529 DWTNYHRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNS 672
+W +YH + + + ++ P I T + IG+S+EGR L +++ S +
Sbjct: 36 EWGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTT 83
>Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 231 NFINSFYSPLLSTHN*NAAKILSKNSNITVIDTKHKSNYFRS*NGE*KQPSQLKQYNSDI 410
NF + Y+P+L+ H + K ++ S +IDT + S + E P+ L++ N
Sbjct: 13 NFYDEPYNPVLNLHIQPSVKDENQRSTWPIIDTSNTSTQIARAHFEKHPPNNLRKSNF-F 71
Query: 411 HF--*RLQQNNRKINIQKT 461
HF +N++ I +++T
Sbjct: 72 HFVIALYDRNSQPIEVERT 90
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 544 HRLDVIHSFIDDLEFDFPSICTSFVIGKSLEGRDLKLLKISNSNANN----ASVWLDAGI 711
H + + +++ ++P+I + GKS+EGR+L +L IS+ + + + +
Sbjct: 79 HNYNEMTAWLKATRLNYPNITHLYSAGKSVEGRELWVLIISDKPKEHKLMEPELKIVGNM 138
Query: 712 HAREWIAPAVATYIADYI 765
H E + Y+A+ +
Sbjct: 139 HGNEVVGREAVLYLAEIL 156
>AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 231 NFINSFYSPLLSTHN*NAAKILSKNSNITVIDTKHKSNYFRS*NGE*KQPSQLKQYNSDI 410
NF + Y+P+L+ H + K ++ S +IDT + S + E P+ L++ N
Sbjct: 13 NFYDEPYNPVLNLHIQPSVKDENQRSTWPIIDTSNTSTQIARAHFEKHPPNNLRKSNF-F 71
Query: 411 HF--*RLQQNNRKINIQKT 461
HF +N++ I +++T
Sbjct: 72 HFVIALYDRNSQPIEVERT 90
>AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF
transcription factor protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 231 NFINSFYSPLLSTHN*NAAKILSKNSNITVIDTKHKSNYFRS*NGE*KQPSQLKQYNSDI 410
NF + Y+P+L+ H + K ++ S +IDT + S + E P+ L++ N
Sbjct: 13 NFYDEPYNPVLNLHIQPSVKDENQRSTWPIIDTSNTSTQIARAHFEKHPPNNLRKSNF-F 71
Query: 411 HF--*RLQQNNRKINIQKT 461
HF +N++ I +++T
Sbjct: 72 HFVIALYDRNSQPIEVERT 90
>Z92973-1|CAB07493.2| 323|Caenorhabditis elegans Hypothetical
protein Y6G8.1 protein.
Length = 323
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -2
Query: 249 KTNL*NFVLC*IWSIILMKLPKFMYYTFSSKQILLVQILK*VFIVILYFHQKVLLLCLLH 70
KT+ FV+ I S +LMK P+ + S QIL++ + ++I + FH + L +
Sbjct: 69 KTSYFLFVILLIDSTLLMKFPQAVIQFDVSLQILMLFLFYVLYICMQAFHLLLFFLSIGR 128
Query: 69 F 67
F
Sbjct: 129 F 129
>U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical protein
K07E3.7a protein.
Length = 1174
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 201 LMKLPKFMYYTFSSKQILLVQI-LK*VFIVILYFHQKVLLLCLLHFD 64
LM L F+Y +S + +L+ I L VF+ +LY H V + +HF+
Sbjct: 1076 LMNLMGFVYVPSTSMRFILLAISLAGVFLSLLYEHFFVEKVVAIHFE 1122
>U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical protein
K07E3.7b protein.
Length = 1203
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 201 LMKLPKFMYYTFSSKQILLVQI-LK*VFIVILYFHQKVLLLCLLHFD 64
LM L F+Y +S + +L+ I L VF+ +LY H V + +HF+
Sbjct: 1105 LMNLMGFVYVPSTSMRFILLAISLAGVFLSLLYEHFFVEKVVAIHFE 1151
>Z70287-10|CAA94299.2| 339|Caenorhabditis elegans Hypothetical
protein R09E10.4a protein.
Length = 339
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 610 SFVIGKSLEGR-DLKLLKISNSNANNASVWLDAGIHAREWIAPAVATY 750
SF GK E + DLK I ++ + S WL EW + + TY
Sbjct: 36 SFFFGKRREPKCDLKNQSIVQADGSRKSAWLGDEPLRHEWFSGILTTY 83
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 636 LQ*FSDDK*STNRWKVKL*VIDKRMYYIQTMVVGPIHAKTEPIFF 502
L+ F D NR+ KL + +R T+V+ P H+K + FF
Sbjct: 225 LKKFHSDDGIFNRFSEKLAKMARRKQQESTLVIDPSHSKDDSAFF 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,706,505
Number of Sequences: 27780
Number of extensions: 344315
Number of successful extensions: 745
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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