Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1o08
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.9  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.9  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 273 PSQRQVSQRVLVSIKPRAPPIKTL 344
           PS +  ++ V+V+  P+APP  T+
Sbjct: 181 PSTKPTNKPVVVTKPPQAPPFATV 204


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 326 RPWFDRYQ 303
           RPW++RYQ
Sbjct: 72  RPWWERYQ 79


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 326 RPWFDRYQ 303
           RPW++RYQ
Sbjct: 73  RPWWERYQ 80


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 326 RPWFDRYQ 303
           RPW++RYQ
Sbjct: 73  RPWWERYQ 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,546
Number of Sequences: 336
Number of extensions: 3656
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)