Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1o03
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787 127 1e-29
12_01_0762 + 6915299-6915532,6916043-6916220,6916490-6916656,691... 120 1e-27
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 118 6e-27
12_01_0764 + 6934570-6934726,6935150-6935316,6935408-6935490,693... 114 6e-26
12_01_0756 + 6869100-6869327,6869943-6870123,6870233-6870399,687... 109 2e-24
12_01_0760 + 6910325-6910558,6911305-6911455,6911949-6912115,691... 108 4e-24
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 105 3e-23
12_01_0759 + 6894556-6894628,6894653-6894738,6895039-6895121,689... 105 3e-23
01_06_1628 + 38745964-38746480,38747116-38747282,38747325-387474... 99 2e-21
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 63 2e-10
12_01_0011 + 90859-91169,92075-92622,92701-92803,92899-92998,934... 44 9e-05
11_01_0011 + 95001-95311,96217-96764,96843-96945,97041-97140,975... 44 9e-05
01_06_1630 + 38753016-38753209,38753904-38754039,38754291-387544... 42 5e-04
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 37 0.014
06_03_0680 - 23470292-23470384,23470499-23470606,23471145-234713... 29 3.7
07_03_1692 - 28733184-28733980,28734306-28734373,28734481-287345... 29 4.8
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 28 6.4
>04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787
Length = 345
Score = 127 bits (306), Expect = 1e-29
Identities = 69/160 (43%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Frame = +1
Query: 166 LGCRVVGFAGTDEKCYYLEKELGFDRAFNYKTV-DIKAALKEGAPRKVDCYFDNVGGQIS 342
+GC VVG AG+D+K L ++ GFD AFNYK D+ AALK P +D YF+NVGG +
Sbjct: 179 MGCYVVGSAGSDDKVRLLREKFGFDDAFNYKKESDLSAALKRCFPEGIDIYFENVGGAML 238
Query: 343 SNIINYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKELKIEGFLVDRWIDRWEEGI 522
++ M GRVA CG IS YN P AIV K L+IEGF+V R+ E
Sbjct: 239 DAVLLNMRVRGRVAACGMISQYNLE-HPDPVHNLTAIVTKRLRIEGFIVSDHYARYREYE 297
Query: 523 NANLRWLVDGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
R++ +GK+ Y E V G +N A +G+ G N GK
Sbjct: 298 EKAARYVKEGKIAYVEDVAEGLENAPAALIGLFSGRNVGK 337
>12_01_0762 +
6915299-6915532,6916043-6916220,6916490-6916656,
6916770-6916852,6916940-6917318
Length = 346
Score = 120 bits (289), Expect = 1e-27
Identities = 66/160 (41%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = +1
Query: 166 LGCRVVGFAGTDEKCYYLEKELGFDRAFNYKTV-DIKAALKEGAPRKVDCYFDNVGGQIS 342
+GC VVG AG+DEK L+ + GF+ AFNYK D++AAL+ P +D YF+NVGG+
Sbjct: 180 IGCYVVGSAGSDEKVSLLKTKFGFNDAFNYKKEPDLEAALRRYFPEGIDIYFENVGGETL 239
Query: 343 SNIINYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKELKIEGFLVDRWIDRWEEGI 522
++ M GR+A CG IS YN P+ IV K L++EGFLV + DR+ +
Sbjct: 240 DAVLPNMRLGGRIAACGMISQYNLE-RPEGVKNLFYIVTKRLRMEGFLVFDFYDRYYQFE 298
Query: 523 NANLRWLVDGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
+ R+L +GK+ Y E V G D A + + G N GK
Sbjct: 299 DEMARYLKEGKVAYVEDVVEGLDAAPAALIKLFTGRNVGK 338
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 118 bits (283), Expect = 6e-27
Identities = 63/159 (39%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Frame = +1
Query: 169 GCRVVGFAGTDEKCYYLEKELGFDRAFNYKTV-DIKAALKEGAPRKVDCYFDNVGGQISS 345
GC VVG AGT+ K L+ +LGFD AFNYK D+K+ALK P +D YFDNVGG+
Sbjct: 179 GCYVVGCAGTNAKVDLLKNKLGFDDAFNYKDEPDMKSALKRYFPDGIDIYFDNVGGETLE 238
Query: 346 NIINYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKELKIEGFLVDRWIDRWEEGIN 525
+ MN YGRVA+CG IS Y ++ +A ++ K + I GF ++ R+ E
Sbjct: 239 AALANMNTYGRVALCGVISEYTDA-GHRAVPDLLEVIYKRITIRGFFAWDFLTRFAEFTG 297
Query: 526 ANLRWLVDGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
W+ GK++ E + G +++ AF + G+N GK
Sbjct: 298 VISDWIRQGKVQVIEDISDGLESVPSAFAALFSGDNIGK 336
>12_01_0764 +
6934570-6934726,6935150-6935316,6935408-6935490,
6935588-6935966
Length = 261
Score = 114 bits (275), Expect = 6e-26
Identities = 64/159 (40%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +1
Query: 169 GCRVVGFAGTDEKCYYLEKELGFDRAFNYKT-VDIKAALKEGAPRKVDCYFDNVGGQISS 345
GC VVG AG+DEK L+ + GFD AFNYK +D++AALK P +D YF+NVGG +
Sbjct: 96 GCYVVGSAGSDEKVNLLKTKFGFDDAFNYKKELDLEAALKRCFPDGIDIYFENVGGAMLD 155
Query: 346 NIINYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKELKIEGFLVDRWIDRWEEGIN 525
++ M GR+A CG IS YN P+ IV K L+++GFLV + D + +
Sbjct: 156 AVLPNMRVAGRIAACGMISQYNLE-QPEGVYNMICIVTKRLRMQGFLVFDFYDMYYQIEE 214
Query: 526 ANLRWLVDGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
+L +GK+ Y E V G D A V + + GK
Sbjct: 215 QIAGYLKEGKVAYTEDVVEGLDAAPAALVKLFTSSSIGK 253
>12_01_0756 +
6869100-6869327,6869943-6870123,6870233-6870399,
6870523-6870605,6870716-6871094
Length = 345
Score = 109 bits (262), Expect = 2e-24
Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
Frame = +1
Query: 169 GCRVVGFAGTDEKCYYLEKELGFDRAFNYKT-VDIKAALKEGAPRKVDCYFDNVGGQISS 345
GC VVG AG+DEK L+ + GF AFNYK +D++ ALK P +D YFDNVGG +
Sbjct: 180 GCYVVGSAGSDEKVKLLKTKFGFHDAFNYKKELDLEGALKRCFPDGIDIYFDNVGGAMLD 239
Query: 346 NIINYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKELKIEGFLVDRWIDRWEEGIN 525
++ M G++ +CG IS YN P + K L++EGFLV +I +
Sbjct: 240 AVLPNMRIGGKITICGMISQYNLE-RPDGVRNLFYLFAKSLRMEGFLVSNYIAIYHRYEK 298
Query: 526 ANLRWLVDGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
+L +GK+ Y E + G + A +G+ G N GK
Sbjct: 299 EMAGYLREGKVVYVEDIVEGLEAAPAALIGLFTGRNVGK 337
>12_01_0760 +
6910325-6910558,6911305-6911455,6911949-6912115,
6912227-6912309,6912395-6912773
Length = 337
Score = 108 bits (260), Expect = 4e-24
Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Frame = +1
Query: 169 GCRVVGFAGTDEKCYYLEKELGFDRAFNYKTV-DIKAALKEGAPRKVDCYFDNVGGQISS 345
GC V+G AG DEK L+ + GFD AFNYK D++AAL+ P +D Y++NVGG++
Sbjct: 172 GCYVIGSAGYDEKVNLLKSKFGFDDAFNYKKEQDLEAALRRYFPEGIDIYYENVGGKMLD 231
Query: 346 NIINYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKELKIEGFLVDRWIDRWEEGIN 525
++ M+ GR+ CG IS YN P+ IV K L++EGF V + DR+
Sbjct: 232 AVLPNMSLGGRIVACGMISQYNLE-QPEGVRNLYYIVTKRLRMEGFHVFDYYDRYYRFEE 290
Query: 526 ANLRWLVDGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
+L + K+ Y E V G D A + + G + GK
Sbjct: 291 EMAGYLKEEKVSYVEDVVEGLDTAPAALIRLFTGRSVGK 329
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 105 bits (253), Expect = 3e-23
Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Frame = +1
Query: 169 GCRVVGFAGTDEKCYYLEKELGFDRAFNYK--TVDIKAALKEGAPRKVDCYFDNVGGQIS 342
GC VVG AG+DEK L+ + GF AFNYK + D+ AL+ P +D YFDNVGG
Sbjct: 193 GCYVVGSAGSDEKVTLLKTKFGFHDAFNYKKESNDLTGALRRCFPDGIDIYFDNVGGATL 252
Query: 343 SNIINYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKELKIEGFLVDRWIDRWEEGI 522
+ M + GRV VCG IS YN P+ I+ K +++EGF V +
Sbjct: 253 DAALVNMRRGGRVVVCGMISQYNLQ-EPEGVHNVIQILSKTIRVEGFAVFNHFGLYPMFE 311
Query: 523 NANLRWLVDGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
+ R+L +GK+ + V G + +A +GM G N GK
Sbjct: 312 DEMARYLKEGKVTVLQDVVKGIEKASEALIGMFSGRNVGK 351
>12_01_0759 +
6894556-6894628,6894653-6894738,6895039-6895121,
6895278-6895650
Length = 204
Score = 105 bits (252), Expect = 3e-23
Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Frame = +1
Query: 169 GCRVVGFAGTDEKCYYLEKELGFDRAFNYKT-VDIKAALKEGAPRKVDCYFDNVGGQISS 345
GC VVG AG+D+K L+ + GFD AFNYK D++AALK P +D F+NVGG +
Sbjct: 41 GCYVVGSAGSDDKVNLLKTKFGFDDAFNYKKETDLEAALKRCFPEGIDIDFENVGGAMLD 100
Query: 346 NIINYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKELKIEGFLVDRWIDRWEEGIN 525
++ M GR+ +CG IS Y+ P+ I+ K L++EGF++ I + +
Sbjct: 101 AVLPNMRLGGRITMCGMISQYHLE-RPEGVRNLMYIITKRLRMEGFVIFDSIAVYRQFEE 159
Query: 526 ANLRWLVDGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
+L +GK+ Y E + G D A +G+ G N GK
Sbjct: 160 EMAGYLREGKVTYLEDIVQGLDAAPAALIGIYNGLNVGK 198
>01_06_1628 +
38745964-38746480,38747116-38747282,38747325-38747440,
38747718-38748114
Length = 398
Score = 99 bits (238), Expect = 2e-21
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 12/170 (7%)
Frame = +1
Query: 169 GCRVVGFAGTDEKCYY-----------LEKELGFDRAFNYKTV-DIKAALKEGAPRKVDC 312
GC VVG AGT++K ++ L+ + GFD AFNYK D+ AALK P +D
Sbjct: 216 GCYVVGSAGTNQKMHHSGFTAMFQVELLKGKFGFDAAFNYKEEPDLTAALKRYFPEGIDI 275
Query: 313 YFDNVGGQISSNIINYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKELKIEGFLVD 492
YF+NVGG + ++ M +GR+AVCG +S N P +V K ++++GF+
Sbjct: 276 YFENVGGPMLDAVLLNMRTHGRIAVCGMVSQ-NALTDPVGIHNIFCLVPKRIRMQGFIQS 334
Query: 493 RWIDRWEEGINANLRWLVDGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
+ + + ++ + DGK+ Y E + G +N A VG+ G+N GK
Sbjct: 335 DHLHMFPQFVSDMAKHYRDGKIVYVEDMSIGLENAPAALVGLFSGKNVGK 384
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 63.3 bits (147), Expect = 2e-10
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Frame = +1
Query: 169 GCRVVGFAGTDEKCYYLEKELGFDRAFNYKTVDIKAALKEGAPRKVDCYFDNVGGQISSN 348
G +VV G K L LG DR NY+ IK LK+ PR D +++VGG++
Sbjct: 457 GNKVVATCGGKCKAALLSS-LGVDRVINYQNEKIKDVLKKEFPRGADIIYESVGGEMFDL 515
Query: 349 IINYMNKYGRVAVCGSISSY--NESCSPK-ATILQPAIVLKELKIEGFLVDRWIDRWEEG 519
+N + +GR+ V G IS Y P+ T L I+ K + GF + ++ W++
Sbjct: 516 CLNALAVHGRLIVIGMISQYQGEHGWKPRNYTGLCDKILAKSQTVAGFFLIQYAHLWQDH 575
Query: 520 INANLRWLVDGKLK 561
++ GKLK
Sbjct: 576 LDKLFDLYASGKLK 589
>12_01_0011 +
90859-91169,92075-92622,92701-92803,92899-92998,
93453-93529,93608-93686,94108-94226,94330-94423
Length = 476
Score = 44.4 bits (100), Expect = 9e-05
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Frame = +1
Query: 223 KELGFDRAFNYKTVDIKAALKE-GAPRKVDCYFDNVGGQISSNIINYMNKYGRVAVCGSI 399
K+LG D F +DIK GA + + VGG +S I+ ++ + G + G +
Sbjct: 332 KQLGADHVFTESQLDIKNIKSLLGALPEPALGLNCVGGNAASVILKFLRQGGTMVTYGGM 391
Query: 400 SSYNESCSPKATILQPAIVLKELKIEGFLVDRWI--DRWEEG---INANLRWLVDGKLKY 564
S T+ + + K+L + GF + +W+ D+ EE I+ L + +GKLKY
Sbjct: 392 SK------KPVTVSTSSFIFKDLSLRGFWLQKWMSSDKAEESRTMIDYLLDLVHEGKLKY 445
Query: 565 E 567
E
Sbjct: 446 E 446
>11_01_0011 +
95001-95311,96217-96764,96843-96945,97041-97140,
97595-97671,97750-97828,98250-98368,98472-98565
Length = 476
Score = 44.4 bits (100), Expect = 9e-05
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Frame = +1
Query: 223 KELGFDRAFNYKTVDIKAALKE-GAPRKVDCYFDNVGGQISSNIINYMNKYGRVAVCGSI 399
K+LG D F +DIK GA + + VGG +S I+ ++ + G + G +
Sbjct: 332 KQLGADHVFTESQLDIKNIKSLLGALPEPALGLNCVGGNAASVILKFLRQGGTMVTYGGM 391
Query: 400 SSYNESCSPKATILQPAIVLKELKIEGFLVDRWI--DRWEEG---INANLRWLVDGKLKY 564
S T+ + + K+L + GF + +W+ D+ EE I+ L + +GKLKY
Sbjct: 392 SK------KPVTVSTSSFIFKDLSLRGFWLQKWMSSDKAEESRTMIDYLLDLVHEGKLKY 445
Query: 565 E 567
E
Sbjct: 446 E 446
>01_06_1630 +
38753016-38753209,38753904-38754039,38754291-38754404,
38755053-38755112,38755223-38755252,38755523-38756206
Length = 405
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 295 PRKVDCYFDNVGGQISSNIINYMNKYGRVAVCGSIS 402
P +D YF+NVGG + ++ M +GR+AVCG +S
Sbjct: 68 PEGIDIYFENVGGPMLDVVLLNMRTHGRIAVCGMVS 103
Score = 34.7 bits (76), Expect = 0.074
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 547 DGKLKYEEKVYHGFDNMVDAFVGMLRGENTGK 642
DGK+ Y E + G +N AFVG+ G+N GK
Sbjct: 116 DGKIVYVEDMSIGLENAPAAFVGLFSGKNVGK 147
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 37.1 bits (82), Expect = 0.014
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = +1
Query: 166 LGCRVVGFAGTDEKCYYLEKELGFDRAFNYKTVDIKAALKEGAPRKV-----------DC 312
LG +V AG++EK K LG D NYKT D A +KE KV D
Sbjct: 166 LGIKVFVTAGSEEKLAAC-KGLGADVCINYKTEDFVARVKEETNGKVTLDMEVYLPGVDV 224
Query: 313 YFDNVGGQISSNIINYMNKYGRVAVCG 393
DN+GG +N + GR+ + G
Sbjct: 225 ILDNIGGLYLQRNLNSLAVDGRLFIIG 251
>06_03_0680 -
23470292-23470384,23470499-23470606,23471145-23471368,
23473628-23473859
Length = 218
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 499 IDRWEEGINANLRWLVDGKLKYE 567
+ RWE ++ LR+LVD KL +E
Sbjct: 42 VARWEPSVDGYLRFLVDSKLVFE 64
>07_03_1692 -
28733184-28733980,28734306-28734373,28734481-28734594,
28734835-28734884,28735012-28735422,28735534-28735610,
28736083-28736257,28736843-28736939,28737070-28737833,
28737900-28738001,28738093-28738174,28739004-28739161
Length = 964
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 355 NYMNKYGRVAVCGSISSYNESCSPKATILQPAIVLKE 465
NYM + G ++ G S + +C+ AT+ QPA+V E
Sbjct: 887 NYMKQNGLTSLAGEQGS-SSTCTGAATVPQPALVESE 922
>06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = +1
Query: 220 EKELGFDRAFNYKTVDIKAALKEGAPRKVDCYFDNVGGQISSNIINYMNKYGRVAVC--- 390
E E D AF YK+ +++ ++E ++ +N Q+S+ +N + K G AVC
Sbjct: 804 ETEFAKDAAFGYKSSNLRQWVEEKTKGRIS---EN---QVSTISVNLLRKEGPNAVCQHL 857
Query: 391 -----GSISSYNESCSPKATILQPAIVLKELKIEGFL 486
GS N + ++ ++ ELK + FL
Sbjct: 858 CSLKKGSACIVNAASERDMSVFAAGMIQAELKGKRFL 894
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,972,887
Number of Sequences: 37544
Number of extensions: 301231
Number of successful extensions: 710
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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