Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1n19
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    22   1.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   3.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   3.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   7.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    20   7.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   9.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   9.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   9.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   9.2  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 88  SFGVRRTFVQFVQNYFQDNSGKHRNFLRFDGVSETIC*V*TASSY 222
           S  +   F  FV  YF    G + ++ +F  VSE +  +   S Y
Sbjct: 31  SLNLSNLFWLFVGTYFPSLIGANEHYSKFFPVSEILSFLIEESGY 75


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 332 FFYFKRKYNLQYWLLSSVQFLP 267
           ++Y+ R+  L YW+ SS   +P
Sbjct: 233 YYYYMREM-LPYWMSSSQYHMP 253


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 332 FFYFKRKYNLQYWLLSSVQFLP 267
           ++Y+ R+  L YW+ SS   +P
Sbjct: 233 YYYYMREM-LPYWMSSSQYHMP 253


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 4/14 (28%), Positives = 10/14 (71%)
 Frame = -2

Query: 238 EFNWLHNWRPFRPN 197
           ++NW++ W+   P+
Sbjct: 626 QWNWVYEWKELIPS 639


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 72  LIYYRNETETSQYLVISRFTN 10
           L+Y++NE E      + R TN
Sbjct: 342 LVYFQNEYEQPSEEDLKRITN 362


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 297 LAAFISPVSTFVFPVNSLLW 238
           L  ++SPVS+     NS +W
Sbjct: 618 LFLYVSPVSSEYNQYNSRIW 637


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 297 LAAFISPVSTFVFPVNSLLW 238
           L  ++SPVS+     NS +W
Sbjct: 618 LFLYVSPVSSEYNQYNSRIW 637


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 183 YAVKTKEIP 157
           YAVKT++IP
Sbjct: 691 YAVKTRKIP 699


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 183 YAVKTKEIP 157
           YAVKT++IP
Sbjct: 781 YAVKTRKIP 789


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,252
Number of Sequences: 438
Number of extensions: 1942
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)