Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1n15
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF090262-1|ABK78775.1|  120|Caenorhabditis elegans glycoprotein ...    51   9e-07
Z75954-2|CAB00107.1|  104|Caenorhabditis elegans Hypothetical pr...    38   0.007
U21308-14|ABB88222.1|  429|Caenorhabditis elegans Tryptophan hyd...    28   7.3  
U21308-13|ABB88221.1|  532|Caenorhabditis elegans Tryptophan hyd...    28   7.3  
AF135186-1|AAD30115.1|  532|Caenorhabditis elegans tryptophan hy...    28   7.3  
U23452-1|AAK31545.2|  284|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>EF090262-1|ABK78775.1|  120|Caenorhabditis elegans glycoprotein
           hormone alpha 2 protein.
          Length = 120

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = +1

Query: 319 ITTNACRGYCESWSLPSIMLGFKRHPVTSLGQCCNIMEAEDVPVKVLCLDGERNLIFKSA 498
           I  N CRG+C S++ P+ +   K++ V +  +CC ++E E +  ++ C  G RNL   SA
Sbjct: 55  IRINRCRGHCFSFTFPNPLT--KKYSVHA--KCCRMVEWEMLETELKCSKGNRNLRIPSA 110

Query: 499 VSCACYHC 522
             C C+ C
Sbjct: 111 TQCECFDC 118


>Z75954-2|CAB00107.1|  104|Caenorhabditis elegans Hypothetical
           protein F58H1.4 protein.
          Length = 104

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 412 QCCNIMEAEDVPVKVLCLDGERNLIFKSAVSCACYHC 522
           +CC ++E E +  ++ C  G RNL   SA  C C+ C
Sbjct: 65  KCCRMVEWEMLETELKCSKGNRNLRIPSATQCECFDC 101


>U21308-14|ABB88222.1|  429|Caenorhabditis elegans Tryptophan
           hydroxylase protein1, isoform b protein.
          Length = 429

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +2

Query: 152 KNCCIITFRFANYGLTGNFEEKRKK---NTNELKTSFFLR 262
           + C I TF+ A Y  T NFEE ++K    TN +K  F +R
Sbjct: 352 QECLITTFQSA-YFYTRNFEEAQQKLRMFTNNMKRPFIVR 390


>U21308-13|ABB88221.1|  532|Caenorhabditis elegans Tryptophan
           hydroxylase protein1, isoform a protein.
          Length = 532

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +2

Query: 152 KNCCIITFRFANYGLTGNFEEKRKK---NTNELKTSFFLR 262
           + C I TF+ A Y  T NFEE ++K    TN +K  F +R
Sbjct: 455 QECLITTFQSA-YFYTRNFEEAQQKLRMFTNNMKRPFIVR 493


>AF135186-1|AAD30115.1|  532|Caenorhabditis elegans tryptophan
           hydroxylase protein.
          Length = 532

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +2

Query: 152 KNCCIITFRFANYGLTGNFEEKRKK---NTNELKTSFFLR 262
           + C I TF+ A Y  T NFEE ++K    TN +K  F +R
Sbjct: 455 QECLITTFQSA-YFYTRNFEEAQQKLRMFTNNMKRPFIVR 493


>U23452-1|AAK31545.2|  284|Caenorhabditis elegans Hypothetical
           protein R07G3.5 protein.
          Length = 284

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = -1

Query: 497 ADLNIKFLSPSKHRTLTGTSSASIMLQHCPNEVT 396
           A+ +IKF + +    +  T +A+I+L+H P+++T
Sbjct: 130 ANSDIKFTNMTMSTMVRATETANIILKHLPDDLT 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,783,849
Number of Sequences: 27780
Number of extensions: 331398
Number of successful extensions: 680
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)