Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1n12
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0131 + 12161268-12161781,12162123-12162867,12162950-121629... 44 9e-05
07_01_1036 + 9021395-9021658,9024214-9024690 40 0.002
08_01_0027 - 195321-195932,197206-197415 38 0.008
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254... 38 0.011
03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539... 36 0.043
08_02_1121 + 24457413-24457528,24458395-24458552,24458927-244590... 33 0.17
02_01_0110 + 819022-819264,819996-820761,820846-820920,821276-82... 33 0.23
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 32 0.40
04_04_1450 + 33692130-33693191 32 0.40
10_08_0051 + 14489255-14490403 32 0.53
08_02_1251 - 25592537-25593380,25593589-25593893 32 0.53
08_01_0794 - 7687480-7687798,7687817-7688523 32 0.53
08_01_0799 + 7734031-7735102,7735453-7735475 31 0.70
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 31 0.93
10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152 31 1.2
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 31 1.2
02_01_0008 - 50576-50671,50767-50829,50918-50961,51048-51129,522... 30 1.6
01_07_0176 - 41733845-41734834,41736058-41736588 30 1.6
08_01_0200 + 1632883-1633913,1634620-1634677 30 2.1
07_01_0484 - 3643294-3643478,3644282-3644555,3644646-3645018,364... 30 2.1
05_07_0285 + 28982502-28982782,28982888-28982989,28983189-289840... 29 2.8
05_05_0215 - 23352363-23352666,23353183-23353495,23353590-23353713 29 3.7
12_01_0252 + 1868670-1869200,1870167-1871120 29 4.9
11_06_0415 + 23306555-23306794,23306842-23307684 29 4.9
11_01_0252 + 1934505-1935032,1936001-1936957 29 4.9
01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252... 29 4.9
08_01_0987 + 9979651-9979746,9979818-9980058,9980947-9981090,998... 28 6.5
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 28 6.5
02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202 28 6.5
08_02_1240 + 25504789-25504794,25505421-25505555,25505854-255059... 28 8.6
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289... 28 8.6
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 28 8.6
>06_02_0131 +
12161268-12161781,12162123-12162867,12162950-12162986,
12163083-12163216,12163298-12163625
Length = 585
Score = 44.4 bits (100), Expect = 9e-05
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Frame = +1
Query: 193 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPVIIFRNFK--YEDLNAIINFMYH 366
D+T DG I+AHR++L A S++FR+ F + + F + K + L ++++F Y
Sbjct: 188 DITFYVDGKPIEAHRVILCARSSFFRRKFNTDWKDRKEVRFSSQKLSFGALYSLVHFFYS 247
Query: 367 GEVNIFQEQLESFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAP 546
+ + + +E+ ++ + +GL I A Q + DL S ++ I
Sbjct: 248 DRLEVDVDDMENLARACKVCKCEGL-QKILIKEATLQRYAEHKSPRDLDSSQKRF--ILH 304
Query: 547 VQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISR 681
QS + P + +I + C N+ EQE NDE S ++SR
Sbjct: 305 GQSLPEEDRLP---SALRHIFEECLANS-REQECYNDE-SNEMSR 344
>07_01_1036 + 9021395-9021658,9024214-9024690
Length = 246
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 211 DGGKIKAHRMLLSACSNYFRQIFKEN--PCQHPVIIFRNFKYEDLNAIINFMYHGEVNIF 384
D + AHR++L++ S FR + + + +I + Y+ L A +++MY E +
Sbjct: 77 DTPAVPAHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAEALLD 136
Query: 385 QEQLESFLITAELLEVKGL 441
++ L+ AE EVK L
Sbjct: 137 EQMASDLLVLAEKYEVKNL 155
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +1
Query: 193 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKEN--PCQHPVIIFRNFKYEDLNAIINFMYH 366
DVT+ G +KAH+ +L++CS F +F + + I + E +A+I F+Y
Sbjct: 109 DVTINTTDGVLKAHKAILASCSPVFESMFLHDLKEKESSTININDMCLESCSALIGFIY- 167
Query: 367 GEVNI--FQEQLESFLITAELLEVKGLTDNIEE 459
G + + F + S L A + + D EE
Sbjct: 168 GTIKLDQFWKHRLSLLAAANKYSISDIKDCCEE 200
>05_04_0228 -
19224901-19224991,19225095-19225219,19225293-19225410,
19225554-19225618,19225760-19225839,19225942-19226005,
19227341-19227480,19227571-19227694,19227781-19227840,
19227922-19227990,19228139-19228288,19229182-19229289,
19229573-19229648,19229960-19230054,19231729-19231803,
19231923-19232043,19232136-19232308,19232647-19232813,
19232944-19233301
Length = 752
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 187 LVDVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPV--IIFRNFKYEDLNAIINFM 360
L DVT +G + AHR+ L A S+ FR +F + I N ++ ++ F+
Sbjct: 585 LSDVTFLVEGKRFYAHRIALLASSDAFRAMFDGGYREKDARDIEIPNIRWNVFELMMRFI 644
Query: 361 YHGEVNIFQEQLESFLITAELLEVKGL 441
Y G V + + + L A+ ++GL
Sbjct: 645 YTGSVEVTSDISQDLLRAADQYLLEGL 671
>03_06_0140 +
31951569-31951710,31951943-31952037,31952141-31953982,
31954065-31954179,31954260-31954897
Length = 943
Score = 35.5 bits (78), Expect = 0.043
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 481 RLSENTSLDLSSKSSKYEDIAPVQSDEPI-NLAPVQSNRDENIP-QVCPVNNVSEQENGN 654
R S N D+ S K + ++S E I NL +S + E ++ P +QENG
Sbjct: 564 RQSYNKQTDVHSMPKKSQKYREMKSKEGIQNLEHKRSTKSEATQLKILPYTAEIQQENGK 623
Query: 655 DEASQDISRPDDS 693
E DI +P DS
Sbjct: 624 HEEDNDIVKPSDS 636
>08_02_1121 +
24457413-24457528,24458395-24458552,24458927-24459042,
24459735-24460400
Length = 351
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 178 ENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPV--IIFRNFKYEDLNAII 351
E L D+T+ G I AHR +L++ S FR +F + + + + + E A +
Sbjct: 182 EGILTDITINATDGSIMAHRAILASRSPVFRSMFSHDLKEKELSTVDISDMSLEACQAFL 241
Query: 352 NFMY 363
N++Y
Sbjct: 242 NYIY 245
>02_01_0110 +
819022-819264,819996-820761,820846-820920,821276-821445,
821644-821742,821835-822134,822211-822318,822443-822514,
822580-822666,822887-822958,823063-823152,823795-823902,
824015-824083,824177-824242,824395-824418
Length = 782
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +1
Query: 454 EEDSAKSQIRLSENTSLDLSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQVCPVNNV 633
++D KS++ L N +DL + ED+A + + L+ N ++ P +
Sbjct: 266 DDDELKSKLNLKPN--IDLKMRKDMDEDLANISLLQKPELSVDNMNSNQEKSDAGPASVA 323
Query: 634 SEQENGN-DEASQDISR--PDDSINTKVKSVLP 723
S ++NG D + + DSIN + SVLP
Sbjct: 324 SGEDNGAVDPETNGLDERVVIDSINDRESSVLP 356
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 229 AHRMLLSACSNYFRQIFKENPCQHPV--IIFRNFKYEDLNAIINFMYHGEVNIFQEQLES 402
AH+++LS S F ++F + + F + E +I FMY GE+ + E++
Sbjct: 365 AHKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLIQFMYSGELKVDIEEITP 424
Query: 403 FLITAELL 426
L+ LL
Sbjct: 425 VLVELLLL 432
>04_04_1450 + 33692130-33693191
Length = 353
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +1
Query: 145 HVTEAFNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIF---KENPCQHPVIIF 315
H A L + D+ + AHR+ L+ S YFR++ N P I
Sbjct: 194 HARNAMEFLLSGDAPFDLEIHVGDATFGAHRLALAGQSLYFRKLLYGQVGNEASSPAIRL 253
Query: 316 RNFKYEDLNAIINFMYH 366
R E A+++++YH
Sbjct: 254 REMSPEAFGAVLHYVYH 270
>10_08_0051 + 14489255-14490403
Length = 382
Score = 31.9 bits (69), Expect = 0.53
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +1
Query: 184 DLVDVTLCCDGGKIKAHRMLLSACSNYFR-QIF---KENPCQHPVIIFRNFKYEDLNAII 351
D DVT G +++AHR +L+A S F+ ++F KE+ + V+ + + E A++
Sbjct: 198 DGADVTFHVAGEEVRAHRYILAARSPVFKAELFGQMKESSSSNTVVNVDDMEAEVFRALL 257
Query: 352 NFMY 363
F+Y
Sbjct: 258 VFIY 261
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 193 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPV--IIFRNFKYEDLNAIINFMYH 366
DV G AHR LL+ CS F+ + + + I + K A+++FMY
Sbjct: 225 DVFFFVGGETFHAHRALLAVCSPVFKALLLSSTAEAAACSITLNDIKPAMFEALLHFMYT 284
Query: 367 GE 372
G+
Sbjct: 285 GD 286
>08_01_0794 - 7687480-7687798,7687817-7688523
Length = 341
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 142 SHVTEAFNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFR 270
S + E F L + + DVT G KI AH+++L+A S+ F+
Sbjct: 174 SDILENFGELLEKGEGADVTFVVGGEKIAAHKIVLAARSSVFK 216
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 142 SHVTEAFNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFR 270
S ++E F L + + DVT G KI AH+++L+A S+ F+
Sbjct: 175 SDLSENFGELLEKGEGSDVTFVVGGEKIAAHKIILAARSSVFK 217
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 31.1 bits (67), Expect = 0.93
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 142 SHVTEAFNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFR-QIFKENPCQH-PVIIF 315
S++++ L + D+T DG AH+++L+A S FR Q+F ++ I
Sbjct: 295 SNMSQHIGQLLTDGKRTDITFEVDGEVFPAHKVVLAARSPVFRAQLFGPMKDKNMKRITI 354
Query: 316 RNFKYEDLNAIINFMYHGEVNIFQE 390
+ + A+++FMY E+ +E
Sbjct: 355 EDMEASVFKALLHFMYWDELPDIEE 379
>10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152
Length = 435
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +1
Query: 184 DLVDVTLCCDGGKIKAHRMLLSACSNYFR-QIF---KENPCQHPVIIFRNFKYEDLNAII 351
D DVT G ++ AHR +L+A S F+ ++F KE+ + ++ + + E A++
Sbjct: 258 DGADVTFHVAGEEVPAHRYILAARSPVFKAELFGQMKESSSSNTIVKVDDMEAEVFRALL 317
Query: 352 NFMY 363
F+Y
Sbjct: 318 AFIY 321
>04_03_0181 -
12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 454 EEDSAKSQIRLSENTSLDLSSKSSKYEDIAPVQSDEPINLAPVQSNRDENI--PQVCPVN 627
EE + ++ E+ S+ S ED Q +P++L P+ + ++ Q P +
Sbjct: 309 EEKEDEPSMQFEESESISTPS----IEDHLHEQLPDPVDLKPLDMSASDSALYGQQAPSS 364
Query: 628 NVSEQENGNDEASQDISRPDDSI 696
++ EQ++ N+E + S D +
Sbjct: 365 DIPEQQSKNEEVKESFSEDKDVV 387
>02_01_0008 -
50576-50671,50767-50829,50918-50961,51048-51129,
52205-52371,52502-52654,52780-52960,53452-53540,
53599-53799,54804-55147,55397-55626
Length = 549
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +2
Query: 200 HYVAMVVKLKLTECCYQPVAIILGKYSKKILASTLLLYSETLNTRT*MRLSTSCIMVK*T 379
HY+ +++ ++L CC + + + SK + L + S TLN+ + T+ I++ T
Sbjct: 277 HYLQIILYIELYACCIEYLILESDNLSKLFPNAHLTIGSMTLNSHVFFAILTTLIVMPTT 336
Query: 380 YFKN 391
+ ++
Sbjct: 337 WLRD 340
>01_07_0176 - 41733845-41734834,41736058-41736588
Length = 506
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 193 DVTLCCDGGKIKAHRMLLSACSNYFRQIF 279
DVT +G + AHR +L+A S +FR+ F
Sbjct: 24 DVTFSVEGRLVHAHRCILAARSLFFRKFF 52
>08_01_0200 + 1632883-1633913,1634620-1634677
Length = 362
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 178 ENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQ----IFKENPCQHPVIIFRNFKYEDLNA 345
E++ DVT G AHR++L+A S F+ KE H VI + + A
Sbjct: 174 ESEGADVTFAVQGETFTAHRLMLAARSPVFKAELYGAMKEKDADH-VIAIVDVQPAVFKA 232
Query: 346 IINFMY 363
+++F+Y
Sbjct: 233 LLHFIY 238
>07_01_0484 -
3643294-3643478,3644282-3644555,3644646-3645018,
3645177-3645233,3646034-3646458
Length = 437
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 160 FNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIF 279
F L ++ VDV L G + AH+++L+A S FR F
Sbjct: 215 FGTLLDNHEGVDVVLSVGGERFHAHKLVLAARSTVFRSKF 254
>05_07_0285 +
28982502-28982782,28982888-28982989,28983189-28984006,
28984594-28985050,28985203-28985242
Length = 565
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +1
Query: 412 TAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAPVQSDEPINLAPVQSN 591
+AE L+ GL + +S KS I L + ++ + D +PV + EPI + S
Sbjct: 37 SAEYLQNFGLGGRTDAESYKSCIPLCVHNDIEPYIQRIVDGDTSPVVTGEPITNLSLSSG 96
Query: 592 RDENIPQVCPVNN 630
P+ P N+
Sbjct: 97 TTHGKPKFIPFND 109
>05_05_0215 - 23352363-23352666,23353183-23353495,23353590-23353713
Length = 246
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 110 GALFILYLGRYYSPSGYGIWK 48
G LF+L+L R S +GYG W+
Sbjct: 5 GVLFLLFLARQASAAGYGGWQ 25
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 193 DVTLCCDGGKIKAHRMLLSACSNYFRQIF 279
DV +G + AHR +L+A S +FR++F
Sbjct: 26 DVAFSVEGRLVHAHRCVLAARSLFFRKLF 54
>11_06_0415 + 23306555-23306794,23306842-23307684
Length = 360
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 193 DVTLCCDGGKIKAHRMLLSACSNYFRQ----IFKENPCQHPVIIFRNFKYEDLNAIINFM 360
DVT G K AHR +L+A S F KE + V+ R+ A+++F+
Sbjct: 198 DVTFDVAGHKFAAHRCVLAARSPVFMAELLGPMKEEDTESHVVAIRDMDARAFKAMLHFI 257
Query: 361 Y 363
Y
Sbjct: 258 Y 258
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 193 DVTLCCDGGKIKAHRMLLSACSNYFRQIF 279
DV +G + AHR +L+A S +FR++F
Sbjct: 26 DVAFSVEGRLVHAHRCVLAARSLFFRKLF 54
>01_06_1763 +
39723596-39723691,39724030-39724672,39724773-39725275,
39725786-39725905,39726356-39726421,39727146-39727256,
39727650-39727726,39727996-39728063,39728384-39728497,
39728593-39728774,39728926-39728994,39729294-39729449,
39729657-39729734
Length = 760
Score = 28.7 bits (61), Expect = 4.9
Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Frame = +1
Query: 361 YHGEVNIFQEQLESFLITAELL--EVKGLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYE 534
Y +V+ +++ + T E L E K L + S ++ + E S D S+ E
Sbjct: 538 YRRKVSSLEKERQHLQSTVEALQEEKKLLHSKLRNTSVTEKVNIIEKPSADKRDASTATE 597
Query: 535 DIAPVQSDEPINLAPVQSNRDENIPQVCPVNNVSE---QENGNDEASQDISRPDDSINT 702
D+ +S L ++ V NNV++ E + D R D+IN+
Sbjct: 598 DLDTGESSSSETLTSAIDTVEDGETSVSRSNNVADFTYLEEVSSSIPHDQLRMIDNINS 656
>08_01_0987 +
9979651-9979746,9979818-9980058,9980947-9981090,
9981253-9981313,9981603-9982061,9982472-9982529,
9983579-9983839
Length = 439
Score = 28.3 bits (60), Expect = 6.5
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +1
Query: 229 AHRMLLSACSNYFRQIFKENPCQHPVIIFRNFKYEDLNAIINFMYHGEVNIFQEQLESFL 408
A R +SA N F + ++ I F L A ++ M G QE+ ESFL
Sbjct: 203 AVRKKISAACNKFEDLIQKAKHSAEAIDFLTSSVLSLEAPLDQMVAGGRQTRQEEFESFL 262
Query: 409 ---ITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYE 534
I E +++ TD K +IR EN + S +SKY+
Sbjct: 263 GCNIPTE-VDILPTTDTHSRGRIK-RIRSKENK--NQGSNTSKYQ 303
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 556 DEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISRPDDSINTK 705
DEP + +Q I VCP N + D AS +++ P +++ K
Sbjct: 1111 DEPPEVDQIQLRSGRQIADVCPPAN-PKSPRSKDVASDEMTDPSPNVSVK 1159
>02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202
Length = 580
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 25 QNNFGNIYFHIPYPLGE*YLPKYKMNNAPQFSLRWN 132
QNN NI + PY + Y+P + P ++ WN
Sbjct: 105 QNNLPNIPNYNPYNVNHQYIPPFYYPPYPPYNTPWN 140
>08_02_1240 +
25504789-25504794,25505421-25505555,25505854-25505964,
25506091-25506183,25506264-25506884,25506970-25507143,
25507239-25507464,25507560-25507651,25507744-25507842,
25507936-25507984,25508071-25508124,25508312-25508484,
25508561-25508632,25508713-25508808,25509032-25509048,
25509704-25509875,25509973-25510071,25510381-25510484,
25510940-25511126,25511212-25511220
Length = 862
Score = 27.9 bits (59), Expect = 8.6
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Frame = +1
Query: 436 GLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAPVQSDEPI--NLAPVQSNRDENIP 609
G D I ED AK +L + L L+ SS Y + I + PV+ N D+
Sbjct: 417 GKEDEIFEDKAK---KLLIDVLLLLADCSSNYPTQPAAHENSGIEPDHEPVEENNDDVNQ 473
Query: 610 QVCPVNNVSEQENGNDEASQDISR---PDDSINTKVKSVL 720
V NN + GN + D + P++ N KS +
Sbjct: 474 AVKKNNNFTSSPKGNSKTILDDDKLPIPNEEFNPVNKSTI 513
>08_02_0747 -
20728073-20728081,20728167-20728353,20728810-20728913,
20729008-20729139,20729583-20729810,20730263-20730358,
20730440-20730511,20730588-20730760,20730947-20731000,
20731086-20731134,20731228-20731326,20731420-20731511,
20731607-20731832,20731927-20732100,20732186-20732809,
20732890-20733033,20733108-20733218,20733516-20733650,
20733963-20733989
Length = 911
Score = 27.9 bits (59), Expect = 8.6
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Frame = +1
Query: 436 GLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAPVQSDEPI--NLAPVQSNRDENIP 609
G D I ED AK +L + L L+ SS Y + I + PV+ N D+
Sbjct: 442 GKEDEIFEDKAK---KLLIDVLLLLADCSSNYPTQPTTHENSGIEPDHEPVEENNDDVNQ 498
Query: 610 QVCPVNNVSEQENGNDEASQDISR---PDDSINTKVKSVL 720
V NN + GN + D + P++ N KS +
Sbjct: 499 AVQKNNNFTSSPKGNSKTVLDDDKLPIPNEEFNPVNKSTI 538
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Frame = +1
Query: 331 EDLNAIINFMYHGEVNIFQEQLESFLITAELLE--VKGLTDNIEEDSAKSQIRLSENTSL 504
E+L A MY+ E+ + QE+ + L+ + LE +K L +E+ ++ N L
Sbjct: 813 ENLEAAKTDMYN-ELTVCQEEKNAALLQVQQLEANLKNLESELEQKQSQVSALEQANEEL 871
Query: 505 --DLSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQ 612
+SS + E+ DE I L + +N+ Q
Sbjct: 872 REKISSLERQLEEARSKLQDEIIKLQGEKERALDNLQQ 909
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,999,301
Number of Sequences: 37544
Number of extensions: 345394
Number of successful extensions: 954
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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