Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1n08
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical pr...    31   0.82 
D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1 pr...    29   2.5  
Z81564-11|CAB04576.1|  436|Caenorhabditis elegans Hypothetical p...    28   4.4  
U49944-1|AAA93415.3|  508|Caenorhabditis elegans Long protein 2 ...    28   4.4  
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF025454-1|AAC71152.2|  378|Caenorhabditis elegans Hypothetical ...    28   5.8  
U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U00065-2|AAL27237.1|  672|Caenorhabditis elegans Prion-like-(q/n...    27   7.7  

>Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical
           protein T05D4.1 protein.
          Length = 365

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
 Frame = +2

Query: 248 SKWRLVK--DSFSPT*T-LKSIVGGINSVRFVCHNNNFASINFSEMLVPAQYAGPQGGLA 418
           +KWR V    S +P+ T LK I   +     +C  N    I   E+L   ++   +G   
Sbjct: 146 AKWRCVHKISSTTPSVTALKEIASNLARYASICQQNGLVPIVEPEILPDGEHCLARGQKI 205

Query: 419 QALLPNAYYHQLQDPTHYLHGT 484
              + +  YH L +   +L GT
Sbjct: 206 TETVLSYVYHALNEHHVFLEGT 227


>D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1
           protein.
          Length = 366

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
 Frame = +2

Query: 248 SKWRLVK--DSFSPT*T-LKSIVGGINS-VRFVCHNNNFASINFSEMLVPAQYAGPQGGL 415
           +KWR V    S +P+ T LK I   + S    +C  N    I   E+L   ++   +G  
Sbjct: 146 AKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQK 205

Query: 416 AQALLPNAYYHQLQDPTHYLHGT 484
               + +  YH L +   +L GT
Sbjct: 206 ITETVLSYVYHALNEHHVFLEGT 228


>Z81564-11|CAB04576.1|  436|Caenorhabditis elegans Hypothetical
           protein K05C4.11 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 216 CLSNNFDKKLHCLQSEVVSE*ALGFEAV 133
           C+  +F  + HC   E+++  ALGF  +
Sbjct: 358 CVEGDFSDEQHCYSREIITSAALGFSLI 385


>U49944-1|AAA93415.3|  508|Caenorhabditis elegans Long protein 2
           protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -3

Query: 343 IMANEADTVNATDD*F*CLCRTERILHKPPLAIRVKVKNVRLLFVKQF 200
           I+ N       T++ + C C T+ ++ K    + V+VKN+++  V+ F
Sbjct: 27  ILTNSTSLEEPTEE-YTCDCNTDDLIQKGNYTLTVEVKNMQVRLVEPF 73


>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
           protein F44G4.8 protein.
          Length = 1367

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 444 TISSKTLRIIFTEHRDEINVQN 509
           T SS TLRI+F+ H D  ++ N
Sbjct: 541 TRSSATLRIVFSTHHDSTSISN 562


>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
           protein F44G4.8 protein.
          Length = 1367

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 444 TISSKTLRIIFTEHRDEINVQN 509
           T SS TLRI+F+ H D  ++ N
Sbjct: 541 TRSSATLRIVFSTHHDSTSISN 562


>AF025454-1|AAC71152.2|  378|Caenorhabditis elegans Hypothetical
           protein F34D6.1 protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 170 SDCKQWSFLSKLFDKQKPNVFDL 238
           +D  +W +L+K F+K KP + D+
Sbjct: 184 NDRDKWHYLTKFFEKYKPKIDDM 206


>U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical
           protein R03H10.1 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 146 PKAHSLTTSDCKQWSFLSKLFDKQKPNVFDLDSNSKWRLVKD 271
           PK   L   +CK  S  S+LF K +P   D   +S W+ +K+
Sbjct: 338 PKDEPLEKENCKTTSNRSRLFKKNEPTKKD---SSIWKRIKN 376


>U00065-2|AAL27237.1|  672|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 25
           protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 269 PSQAATCYSSQGQKR*AFVCQ 207
           P  A +CYSS G  R   +CQ
Sbjct: 71  PQDACSCYSSSGSSRFGTICQ 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,941,386
Number of Sequences: 27780
Number of extensions: 200451
Number of successful extensions: 495
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)