Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1n05
(779 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 38 0.002
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 36 0.007
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 35 0.015
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 33 0.035
SPBC839.12 |rpc31||DNA-directed RNA polymerase III complex subun... 32 0.080
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.11
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 31 0.14
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 31 0.24
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 0.57
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 29 0.75
SPMIT.02 |||mitochondrial DNA binding endonuclease|Schizosacchar... 29 0.75
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.75
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 29 0.75
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.99
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 28 1.3
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 1.3
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.3
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 2.3
SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr ... 27 2.3
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 3.0
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 3.0
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 3.0
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 27 4.0
SPAC15A10.02 |taf12||transcription factor TFIID complex subunit ... 27 4.0
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 4.0
SPBC409.21 |sec66||ER protein translocation subcomplex subunit S... 26 5.3
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 26 5.3
SPCC338.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 7.0
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 26 7.0
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 26 7.0
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 7.0
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 26 7.0
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 7.0
SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces pomb... 26 7.0
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 26 7.0
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 7.0
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 26 7.0
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 26 7.0
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 7.0
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 26 7.0
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 25 9.2
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 9.2
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 9.2
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 25 9.2
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 37.9 bits (84), Expect = 0.002
Identities = 31/149 (20%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Frame = +3
Query: 189 KMSSHEQQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLL 368
K HE RR+L +Q S ++ L QE ++ +N L
Sbjct: 289 KSYKHEYANICESLRRALVLIQGSCTEKILRFKEKILDLLEMKQQEENDRISHIEYENDL 348
Query: 369 S-KETQANL-DTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKE 542
+ K+ + + + +++ + + K SEK ++ ++ L+D L E + LR + + +
Sbjct: 349 TVKKLKRRISELEMAVKEYESEKSYSEKEYEEKISSLRIELEDKLAEIDMLRNKLLKEEH 408
Query: 543 ENASLKQMLEEANSFVEIIKEELADDSNN 629
++ S + LEE + +V I+++ ++ N
Sbjct: 409 KHHSTSEKLEELSKYVASIQDKERNNGQN 437
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 35.9 bits (79), Expect = 0.007
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 19/148 (12%)
Frame = +3
Query: 189 KMSSHEQQESIRITRRSLKTLQHS--ANDRENLVG-RPTKGLKHQLSQESPGESVEVKRK 359
K+ S + ES+ I S+K+ H A EN T L+HQ + ++E K
Sbjct: 231 KIVSQKGMESLEIMLNSMKSENHQRMAMLEENHARVMETAELQHQAELQDFASNIEQKAN 290
Query: 360 NLLSK------ETQANLDTKI----SEDDLTNPKGASEK--YWQILAEKRQLALQDALD- 500
+L+ + + + KI SE++L + EK + + E LA+Q +
Sbjct: 291 SLIMEYKNELQSAEEHFSHKIKELTSENELKISRLQEEKDSLLKKVQEGASLAMQRVQNK 350
Query: 501 ---ENEKLRKTIEELKEENASLKQMLEE 575
E ++L+ I+ L+EEN SLKQ +E+
Sbjct: 351 HDLEKKRLQSAIQPLQEENNSLKQQIEQ 378
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 34.7 bits (76), Expect = 0.015
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Frame = +3
Query: 219 IRITRRSLKTLQHSANDRE-NLVGRPTKGLKHQLSQESPGESVEVKRKNLLSKETQANLD 395
+R T +H A+ E + + +G + + P VEV + LL + +A+ D
Sbjct: 58 LRAEAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADED 117
Query: 396 TKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEE 575
S+D + + SE I K + Q+++D + + EE E+ + + + E
Sbjct: 118 ASDSDDSVDSSNKNSEV--SIKRRKTESNSQESVDSSNS-ESSDEESDSEDETQQLLREL 174
Query: 576 ANSFVEIIKEELADDSNN 629
N E +E++ + N
Sbjct: 175 ENIKQERKREQMLQEEKN 192
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 33.5 bits (73), Expect = 0.035
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 8/148 (5%)
Frame = +3
Query: 318 SQESPGESVEVKR----KNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLAL 485
S +SP S V + +++ K + +L SED P G +K + R +
Sbjct: 84 STQSPETSENVVKNSVDESVAEKPEKEDLAVIESEDKAAKPDGEIKKNVETEVTSRSTSS 143
Query: 486 QDALDENEKLRKTIEELKEE-NASLKQMLEEANSFV---EIIKEELADDSNNDTGIDVND 653
Q+ DE EK KT+ +L E+ + +K++ E N E +K D T + +
Sbjct: 144 QEK-DELEKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKRE 202
Query: 654 VSXXXXXXXXXXXKND*RKHSTANQSKQ 737
+ +N+ K K+
Sbjct: 203 AALEEFQSKLLIRENEINKRELKMNGKE 230
Score = 29.5 bits (63), Expect = 0.57
Identities = 32/138 (23%), Positives = 62/138 (44%)
Frame = +3
Query: 204 EQQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLLSKETQ 383
E Q + I + + N +E+ + + K L+++L + E +R LS E
Sbjct: 207 EFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATKLS-EAN 265
Query: 384 ANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQ 563
N + + E + K A ++ + +E + A Q E ++L ++E+ + A KQ
Sbjct: 266 ENFNNRFKEFE-EREKSAIKQNKEQSSEGSKTANQT--HEQKELINSLEKKVSDIALEKQ 322
Query: 564 MLEEANSFVEIIKEELAD 617
+LEEA ++ E A+
Sbjct: 323 LLEEAVERYKLAMVEFAE 340
>SPBC839.12 |rpc31||DNA-directed RNA polymerase III complex subunit
Rpc31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 32.3 bits (70), Expect = 0.080
Identities = 27/96 (28%), Positives = 46/96 (47%)
Frame = +3
Query: 351 KRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIE 530
KRKN + +LD K ++L GA+ + A +R+L ++ +D K + +
Sbjct: 94 KRKNDNLSLSDLDLDPKFFPEELRKTLGAASATGRKRA-RRKLDMKTFIDFTIKAQDLKD 152
Query: 531 ELKEENASLKQMLEEANSFVEIIKEELADDSNNDTG 638
E E A+ + EE + +E E+ DD +ND G
Sbjct: 153 ESSE--AAHPNIEEEPDEGLEEEDEDFGDDDDNDYG 186
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.9 bits (69), Expect = 0.11
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Frame = +3
Query: 240 LKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLLSKE-----TQANL-DTK 401
LK LQ+S + E L+ + QL E+ + N L KE +Q L + +
Sbjct: 312 LKELQNSNGELEKLLEAAQSSFEEQLESHKEAEASLKSQINFLEKEVSSLESQLKLANER 371
Query: 402 ISEDDLTNPKGASE-KYWQILAE-----KRQLALQDALDEN----EKLRKTIEELKEENA 551
+ D SE KY +L K Q ++ D E +K +T +E++
Sbjct: 372 LRHYDEIEISDMSELKYSNLLNNSMKGFKGQSSVSDLYSERLYYKQKYEQTCQEVERLQR 431
Query: 552 SLKQMLEEANSFVEIIKEE 608
S ++EEAN ++KE+
Sbjct: 432 SYNHVMEEANLQHPLVKEQ 450
Score = 27.5 bits (58), Expect = 2.3
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +3
Query: 336 ESVEVKRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEK- 512
++VEV+ ++ + T+ L +++E + +N +KY LA ++ L + + E K
Sbjct: 941 DNVEVEAISIELERTKEKL--RMAELEKSN---IQQKY---LASEKTLEMMNETHEQFKH 992
Query: 513 -LRKTIEELKEENASLKQMLEEANSFVEIIKEELADDS 623
+ I +E+ SL+ L + N VE++KEE S
Sbjct: 993 LVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSS 1030
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 31.5 bits (68), Expect = 0.14
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +3
Query: 297 KGLKHQLSQESPGESVEVKRKNLLSKETQANLDTKISE---DDLTNPKGASEKYWQILAE 467
K K++ +++ G S + N L ++ ++D+K E D+ + K L
Sbjct: 39 KKRKNRKKKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSDLVR 98
Query: 468 KRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEE 608
+ Q+ +A + E + K+E+ +K+ LE+++ V +KEE
Sbjct: 99 RIQIQRDEAEQKAEIYNRDALNTKQEHLDIKKRLEKSDETVCKLKEE 145
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 30.7 bits (66), Expect = 0.24
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Frame = +3
Query: 237 SLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESV---EVKRKNLLSKETQANLDTKIS 407
S+ T Q + V + G+ + ++E V E K++ T NL TK S
Sbjct: 1163 SVATHQRGSFSSSTGVKKSFNGILREAAREEGSSQVIYQESKKRISNGSPTSWNLLTKPS 1222
Query: 408 EDDLTNPKGASE-KYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEA-- 578
+ PK + +I+ E+++ ++ RKTIEE+++E K EE+
Sbjct: 1223 PRSASLPKNSQPLSISEIMTEQKEEI--ESQKRRSSFRKTIEEIQQEEEFQKWWEEESLR 1280
Query: 579 -NSFVEIIKEELADDSNNDTG 638
+ I+K E +N G
Sbjct: 1281 VQKELGILKTERDTSTNRKQG 1301
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.5 bits (63), Expect = 0.57
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Frame = +3
Query: 336 ESVEVKRKNLLSKETQANLDTKISE-----DDLTNPKGASEKYWQILAEKRQLALQDALD 500
E V+ LL E +L+ ++S+ + +T K + Y L E+ D LD
Sbjct: 681 ELVKSNDNKLLLNEQIESLNDQLSQLKTEMESVTTSKESLADYLSNLKERHN----DELD 736
Query: 501 E-NEKLRKTIEELKEENASLKQMLEEANSFVEIIKE 605
N+KLR+ E + N+SLK +EE N+ ++E
Sbjct: 737 SLNKKLRE-FEGILSSNSSLKSEIEERNNQYVTLRE 771
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 29.1 bits (62), Expect = 0.75
Identities = 19/113 (16%), Positives = 53/113 (46%)
Frame = +3
Query: 189 KMSSHEQQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLL 368
K +S Q+E ++ + L+T+Q + + + + Q Q++ + + ++
Sbjct: 163 KKTSTVQEEELQNAGKKLETVQENPQAYSKVTQQ-----EPQAGQKAVPQEPQANQQETS 217
Query: 369 SKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTI 527
S + +++ D + ++DD PK ++++ L + Q + ++ + + R I
Sbjct: 218 SNQEESSFDRQETQDDKQKPKTTQQEHYN-LRNRNQATITNSNSKPQTRRSKI 269
>SPMIT.02 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 384
Score = 29.1 bits (62), Expect = 0.75
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 438 SEKYWQI-LAEKRQLALQDA-LDENEKLRKTIEELKEENASLKQ 563
++KYW L +K L L+DA L+ EK K +EE++ E SLKQ
Sbjct: 196 TKKYWDYYLFKKAFLILEDANLNSFEKNSK-LEEIRIEKKSLKQ 238
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.1 bits (62), Expect = 0.75
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 345 EVKRKNLLSKETQANLDTKISEDDLTNP--KGASEKYWQILAEKRQ----LALQDALDEN 506
+ K+K ++T A+ + SE D++ P +S K Q KR+ ALQ L+E
Sbjct: 199 QAKKKGSTGEDTLASSEVS-SEVDISTPAENDSSAKGKQAAGSKRKGPNVTALQKMLEEK 257
Query: 507 EKLRKTIEELKEENASLKQMLEEANSFVEIIKEE 608
+ + ++EE A + + + E KEE
Sbjct: 258 RAREEEEQRIREEEARIAEEEKRLAEVEEARKEE 291
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 29.1 bits (62), Expect = 0.75
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +3
Query: 483 LQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELADDSN 626
+Q + E E RKT++++ E+ S+++ E+ + ++ EEL ++N
Sbjct: 43 IQSQIQEIEAFRKTVDDMYEKQKSIRETYEKDINKLKRELEELGVEAN 90
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 28.7 bits (61), Expect = 0.99
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +3
Query: 351 KRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIE 530
K +L + + + K E+DL N + + L E R+L L++ +++KLR +E
Sbjct: 489 KLTSLQEQNNEFDRQLKEQEEDLQNKE-------EELTELRKL-LREQTQDSQKLRLLVE 540
Query: 531 ELKEENASLKQ 563
+L+ E LKQ
Sbjct: 541 QLELERQDLKQ 551
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 474 QLALQDALDENEKLRKTIEELKEENASLKQMLEE 575
QL LQ E EKL +++LK +NA+ ++ +E
Sbjct: 686 QLKLQVVTSEYEKLETQLKDLKTQNANFHRLEQE 719
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +3
Query: 399 KISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEA 578
K+ DL N K +I++ +RQL EN+KL++T+E A L++ + E
Sbjct: 1158 KLGLSDLQNHVKRISKEMEIISCQRQLLFL----ENKKLKRTVESSNRVIADLQRGITEK 1213
Query: 579 NSFVEIIKEELADDSN 626
+ V E + + SN
Sbjct: 1214 D--VSSTSESVGERSN 1227
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 336 ESVEVKRKNLLSKETQANLDTKISEDDLTN-PKGASEKYWQILA-EKRQLALQDALDENE 509
+++ K K L D + S L+N K +EK I ++ + L D L +
Sbjct: 961 QTISSKYKELEKDYLNIMADYQHSSQHLSNLEKAINEKNLNIRELNEKLMRLDDELLLKQ 1020
Query: 510 KLRKT-IEELKEENASLK 560
+ T ++EL+EENASLK
Sbjct: 1021 RSYDTKVQELREENASLK 1038
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 507 EKLRKTIEELKEENASLKQ---MLEEANSFVEIIKEELADDSNNDTGID 644
E++ + +L+EE A + ++E ANS VE++ E L+ N T D
Sbjct: 867 ERVLQLTNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQVTIAD 915
Score = 25.8 bits (54), Expect = 7.0
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +3
Query: 204 EQQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQL-SQESPGESVEVKRKNLLSKET 380
E +E+ + R+ TL + E + ++ L + S P + +E++++ L K
Sbjct: 1836 EVREANQTLRKDQDTLLRENRNLERKLHEVSEQLNKKFDSSARPFDEIEMEKEVLTLK-- 1893
Query: 381 QANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLK 560
+NL K DDL + K ++ A K Q + +EN +L + + L++E L+
Sbjct: 1894 -SNLAQK---DDLLSSLVERIKQIEMFALKTQKDSNNHREENLQLHRQLGVLQKEKKDLE 1949
Query: 561 QML 569
L
Sbjct: 1950 LKL 1952
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/89 (23%), Positives = 43/89 (48%)
Frame = +3
Query: 390 LDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQML 569
L+T++S + L+ + + +L + D LD + K+R + +L + S++ M+
Sbjct: 1020 LETQMSAEQLSYARIIQQSAKSLLT-----VINDILDLS-KVRAGMMKLTSQRFSVRAMM 1073
Query: 570 EEANSFVEIIKEELADDSNNDTGIDVNDV 656
E+AN + + + N IDV D+
Sbjct: 1074 EDANETLGTLAFSKGIELNYTVDIDVPDI 1102
>SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 240
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 531 ELKEENASLKQMLEEANSFVEIIKEELADDSNND 632
E +EEN + + ++EA +E++ E DD +ND
Sbjct: 135 EEEEENDYIDEDVDEAGYDIEVVDEAENDDMDND 168
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 480 ALQDALDENEKLRKTIEELKEENASLKQMLEE 575
+L+ ENE+LR+ ++ EEN S+++ L E
Sbjct: 651 SLESLKRENEELREQLKVEHEENISMQKQLSE 682
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 492 ALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKE 605
+++ EKL + +LKEE L EE ++ IK+
Sbjct: 370 SVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKK 407
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 3.0
Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Frame = +3
Query: 189 KMSSHEQQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLL 368
+ S+ + +E + + S +T+ D E+ + + +S S++ + NL
Sbjct: 363 RTSNSQLEEEMVELKESNRTIHSQLTDAESKLS------SFEQENKSLKGSIDEYQNNLS 416
Query: 369 SKETQANLDTKISEDDLTNPKGASEKYWQILAEK--RQLALQDALDENEKLRKTIE---- 530
SK+ + E+ ++ A+ K +I +E+ + ++D + LR +
Sbjct: 417 SKDKMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSSSN 476
Query: 531 ELKEENASLKQMLEEANSFVEIIKEE 608
ELKE++A + + +E N+ E IKE+
Sbjct: 477 ELKEKSALIDKKDQELNNLREQIKEQ 502
Score = 25.4 bits (53), Expect = 9.2
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +3
Query: 318 SQESPGESVEVKRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQL--ALQD 491
S E + ++ +N+ S +T+ ++D + S +Y +L Q +L+D
Sbjct: 1012 SNERLMDDLKNNGENIASLQTEIEKKRAENDDLQSKLSVVSSEYENLLLISSQTNKSLED 1071
Query: 492 ALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELA 614
++ + + K +++L +E LEE S + EE A
Sbjct: 1072 KTNQLKYIEKNVQKLLDEKDQRNVELEELTSKYGKLGEENA 1112
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 459 LAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEE--ANSFVEIIKEELADDSNND 632
L ++RQ ++ E + R + + +E+N S K EE + S+ E E+++ D+ +
Sbjct: 156 LKKRRQERSARSVSERTRKRSPVSDYEEQNESEKSEEEEGYSPSYAEEKVEQVSKDNASA 215
Query: 633 TGIDVNDV 656
D+N +
Sbjct: 216 NLYDLNAI 223
>SPAC15A10.02 |taf12||transcription factor TFIID complex subunit A
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 26.6 bits (56), Expect = 4.0
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 453 QILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKE---ELADDS 623
++L++++ L +D EK+ +EEL +LE A+ FVE + LA
Sbjct: 341 RLLSKRKLHDLLQQIDSEEKIEPEVEEL---------LLEIADEFVESVTNFACRLAKHR 391
Query: 624 NNDTGIDVNDV 656
+DT +DV DV
Sbjct: 392 KSDT-LDVRDV 401
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 453 QILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELAD 617
++ +K+ L LQ NE + E++KEEN K++ +E SF+ I++ +
Sbjct: 175 ELFTQKQMLQLQ-----NENFKDDYEKIKEEN---KRLYKERKSFLSKIEKSACE 221
>SPBC409.21 |sec66||ER protein translocation subcomplex subunit
Sec66 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 192
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 501 ENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELADDSNNDTGI 641
ENEK+ I+ + ++ S+ Q + E EEL + + G+
Sbjct: 145 ENEKIHSIIDNIPKDIDSISQRWQTEKILYEAADEELRIQAQKELGV 191
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 414 DLTNPKGASEKYWQILAEKRQLALQDALDENEKL 515
DL N S W + QL L +DENE++
Sbjct: 194 DLCNHSSKSNAKWSFSEDAMQLYLDKDIDENEEV 227
>SPCC338.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 141
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 459 LAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSF 587
L E+R L ++L E K+ EE+ + + KQ+L EA+ F
Sbjct: 40 LREQRYEFLANSLGERTSSLKSQEEMVSVSRNGKQLLSEASFF 82
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/64 (21%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 240 LKTLQHSANDRENLVGRPTKGLKH-QLSQESPGESVEVKRKNLLSKETQANLDTKISEDD 416
L++++ S N+ + +P + + + ++++ G E + +N+ + E+QAN E+
Sbjct: 383 LRSVEGSLNEELSEEEKPAESREQLESAEQTNGVKPETQAQNMSASESQANSPAPPVEEG 442
Query: 417 LTNP 428
T P
Sbjct: 443 NTQP 446
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 231 RRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNL 365
RR+L + ++ EN G+ T GL HQ E ++ +NL
Sbjct: 557 RRALDICRRASELAENKNGKVTPGLIHQAISEMTASPLQKVLRNL 601
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/51 (21%), Positives = 29/51 (56%)
Frame = +3
Query: 465 EKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELAD 617
E+ Q ++ ++ E + +E ++ ++KQ +E+ + + I++EEL +
Sbjct: 605 EEEQEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQKKTRLMILREELQE 655
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 25.8 bits (54), Expect = 7.0
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 351 KRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEK--LRKT 524
++ LS E + L K S + +NP+ S ++ QIL +K +L + + K LR
Sbjct: 135 RKMQFLSLEPLSLLLLKDSFINKSNPEYESMQHQQILLKKLKLHFPRRKENSWKRSLRSG 194
Query: 525 IEELKEENASLKQMLEEANS 584
+ EL ++ ++ + E N+
Sbjct: 195 LIELLNQSFEVRMLTHENNN 214
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 486 QDALDENEKLRKTIEE-LKEENASLKQMLEEANSFVEIIKEELADD 620
++ALD + K R EE L E + K LEE E EEL D+
Sbjct: 619 KEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDN 664
>SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 392
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 327 SLAKVDVSVPSLVYPPNFPYHLLNVVMSSVIVLLFLWIPV 208
SL+ VDVS PSL + P L NV S + LL +W P+
Sbjct: 50 SLSSVDVSSPSLPLREHLP--LKNVY--SQVPLLPVWSPI 85
>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1077
Score = 25.8 bits (54), Expect = 7.0
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 195 SSHEQQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLLSK 374
++H+ + R+ R+ T D LVG P L H + G+S+ ++ L
Sbjct: 963 AAHKFNSNFRLLTRASDTANLDIFDAFQLVGEPNVILSH-IKMAEKGKSIILRVYESLGG 1021
Query: 375 ETQANLDTK-ISEDDLTNPKGASE 443
+++A L K ++ +T G E
Sbjct: 1022 KSRARLVIKSLTVASVTKCNGLEE 1045
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/80 (22%), Positives = 38/80 (47%)
Frame = +3
Query: 372 KETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENA 551
K + + +T++ D T S+K AEK +L + ++L +R +EEL +E
Sbjct: 191 KGLKRDQETQVKVDQATLTHYRSDKE---RAEKIELRVHESLKRISCIRSKVEELDQEIT 247
Query: 552 SLKQMLEEANSFVEIIKEEL 611
++ +E E ++++
Sbjct: 248 ETARLQDELFKSTEEYEQQM 267
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 495 LDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELADDSN 626
L+ RK EEL+E+ +S+K + N ++II+ +DSN
Sbjct: 5 LEGTSLARKVREELREQISSIKSVDPYFNVSLKIIQVGGREDSN 48
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 7.0
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Frame = +3
Query: 321 QESPGESVEVKRKNLLSKETQANLDTKISEDDLTNPKGA-SEKYWQILAEKRQLALQDAL 497
+E P + ++K T+ D K E PK A SE Q + + A +
Sbjct: 157 EEKPMPDLGAEQKESAPSSTKPAPDAKEPEFSSPKPKPAKSEPVKQSKPKATETARPSSF 216
Query: 498 DENE------KLRKTI-EELKEEN---ASLKQMLEEANSFVEIIKEELADDSNNDTGIDV 647
NE ++R I E LKE ASL E S V ++++ D+ +TG+ +
Sbjct: 217 SRNEDRVKMNRMRLRIAERLKESQNRAASLTTFNECDMSAVVALRKKYKDEILKETGVKI 276
Query: 648 NDVS 659
+S
Sbjct: 277 GFMS 280
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 274 SLSFAECCNVFSDRLVILMDSCCS 203
SLSF E CN ++ ++ CC+
Sbjct: 2404 SLSFKELCNYLKKKICYILAWCCT 2427
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 25.8 bits (54), Expect = 7.0
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 375 ETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENAS 554
E + N K ED + N + K + +E + D DE+E +K + K NAS
Sbjct: 150 EKKRNALKKEQEDLIQNSATSHSKSDNLDSESADDS--DLADESELSKKYTSDRKIRNAS 207
Query: 555 LKQMLEEANSFVEIIKE 605
K +LE + + +E
Sbjct: 208 KKALLELHRNTARLTRE 224
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 25.4 bits (53), Expect = 9.2
Identities = 27/145 (18%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 183 IFKMSSHEQQESIRITRRSLKTLQHSANDRENLVGRPTKGLK-HQLSQESPGESVEVKRK 359
+FK ++ Q + + + ++ + N + T HQ +Q + ++
Sbjct: 230 LFKKNNAMQNRTTSNIKSNASAIEKNKETILNALNNSTLNENGHQDTQNEVLRDIVLEHP 289
Query: 360 NLLSKET-QANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEEL 536
+++T ++N D S K+ Q E ++ +D +EKL E +
Sbjct: 290 TAKAQDTGESNKDNNTSTSKHKKRPKRLSKFKQAKLETKKSGNKDHATSSEKLSLGNESI 349
Query: 537 KEENASLKQMLEEA-NSFVEIIKEE 608
N + +EE N+ +I++EE
Sbjct: 350 HSINETRSSSIEEPDNADNKIVEEE 374
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.4 bits (53), Expect = 9.2
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 465 EKRQLALQDALDENEKLRKTIEELKEENASLKQMLE--EANSFVEIIKEELAD 617
E +LA + A D E + IEEL+ + +LE E E++ EE AD
Sbjct: 943 EDYELARKMASDALELDEEDIEELETNRGVVYHLLEENETGKLDELVLEEYAD 995
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 495 LDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEE 608
+++ + +K IEEL+ + + Q +EE + IKE+
Sbjct: 856 MEQYDARKKEIEELESKMSDFDQSVEELQDEMNSIKED 893
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 552 SLKQMLEEANSFVEIIKEELADDSNNDTGIDV 647
S Q + +A SFV+ IK DDS++++ D+
Sbjct: 572 SFFQGVSDAKSFVKKIKSTYIDDSSSNSPSDI 603
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,840,596
Number of Sequences: 5004
Number of extensions: 56001
Number of successful extensions: 268
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -