Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1m24
(329 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 0.60
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 0.60
Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical pr... 29 0.79
Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical pr... 29 0.79
U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z81557-11|CAB04531.2| 319|Caenorhabditis elegans Hypothetical p... 27 2.4
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 26 7.3
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z78546-1|CAB01769.1| 364|Caenorhabditis elegans Hypothetical pr... 25 9.7
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 29.5 bits (63), Expect = 0.60
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 7 FSCKFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQNNV----NALQEFQKDVNL 174
F +F+ H +R+ + E ++ ++I + ++K Q ++ N LQE ++ NL
Sbjct: 3122 FIKQFMSLFHEKRSDLEEEKIHLNIGLNKISETEEQVKELQKSLKLKSNELQEKKEAANL 3181
Query: 175 LLTKMIGD 198
L +M+GD
Sbjct: 3182 KLKEMLGD 3189
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 29.5 bits (63), Expect = 0.60
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 7 FSCKFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQNNV----NALQEFQKDVNL 174
F +F+ H +R+ + E ++ ++I + ++K Q ++ N LQE ++ NL
Sbjct: 3122 FIKQFMSLFHEKRSDLEEEKIHLNIGLNKISETEEQVKELQKSLKLKSNELQEKKEAANL 3181
Query: 175 LLTKMIGD 198
L +M+GD
Sbjct: 3182 KLKEMLGD 3189
>Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 29.1 bits (62), Expect = 0.79
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +1
Query: 4 LFSCKFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQN 132
LF C C + R M + V+ N+T+ H + + S ++
Sbjct: 129 LFECGSFCASFRHSDMFNSGVFVLKTNETVFHDMEQHVASAES 171
>Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 29.1 bits (62), Expect = 0.79
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +1
Query: 4 LFSCKFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQN 132
LF C C + R M + V+ N+T+ H + + S ++
Sbjct: 129 LFECGSFCASFRHSDMFNSGVFVLKTNETVFHDMEQHVASAES 171
>U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical
protein C24G7.1 protein.
Length = 608
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 64 QLVVSINDTILHTLTNEI-KSGQ---NNVNALQEFQKDVNLLLTKMIGDLLHSGNNEMVE 231
Q+ + I T NE+ K+GQ N +N + + +V +L+ LLH GN ++ E
Sbjct: 135 QITICNFTPIRKTFVNEMNKTGQISPNMINYIMHWFTEVPILIGSSNWQLLHEGNKDLQE 194
>Z81557-11|CAB04531.2| 319|Caenorhabditis elegans Hypothetical
protein F59A1.7 protein.
Length = 319
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 VCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLT--KMIG 195
V F HRE+ ++ L +++ND + + N +AL E V +++ K +
Sbjct: 96 VQFNHREKRCFTKNALKIALNDVTVLIENPHFQLSHFNFSALDEDTAAVETVMSWFKSVS 155
Query: 196 DLLHSGNNEMVEDEYCSTD 252
D E + E C+ D
Sbjct: 156 DSKKLWKVEKITLEACNCD 174
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 25.8 bits (54), Expect = 7.3
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 37 RERTMISEMQLVV-SINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHSG 213
R+ +S+ ++ V +NDT +T+ G NV E +KD L K+ ++H G
Sbjct: 301 RDYKFVSQAEITVPGMNDTEEWQITD----GAFNVMGFSEREKDD---LYKLCSAIMHIG 353
Query: 214 NN---EMVEDEYCSTDDDQPPISPKK 282
N+ + DE DD P + K
Sbjct: 354 NSTFKQKPRDEQAEVDDMTSPTAACK 379
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
protein C44H9.4 protein.
Length = 1099
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 128 WPDLISLVSVCNIVSFMLTTNCISDIMVRSLCVKQTNL 15
W DL++L S + S+ +N + I SLC +QTN+
Sbjct: 318 WEDLMALTS--KLPSY---SNSLGTIYTHSLCERQTNM 350
>Z78546-1|CAB01769.1| 364|Caenorhabditis elegans Hypothetical
protein T21H8.3 protein.
Length = 364
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 64 QLVVSINDTILHTLT---NEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHSGN 216
QL++ +I+H N+ +G N+V+ ++FQ++ N+ K + L+ N
Sbjct: 190 QLILDALVSIVHLCLYNYNKRTTGNNSVSLSEQFQRNENMKTLKQVTPLMILSN 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,993,552
Number of Sequences: 27780
Number of extensions: 126226
Number of successful extensions: 359
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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