Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1m21
(739 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 168 8e-43
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 148 9e-37
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 110 2e-25
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 108 7e-25
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 105 5e-24
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 49 6e-07
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.69
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 1.6
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 27 2.8
SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces po... 27 2.8
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 4.9
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 4.9
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.4
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 6.4
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 25 8.5
SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27 |Schizo... 25 8.5
SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr 1|... 25 8.5
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 168 bits (408), Expect = 8e-43
Identities = 81/186 (43%), Positives = 111/186 (59%)
Frame = +3
Query: 81 KVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRY 260
K ++ LFINN+ VD+V +P E +I +VA+ D+ D+D+AV A+ AF
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTD 76
Query: 261 SPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAG 440
+PWR ++QRG YLA +ETLD GK + + +V +A RYY G
Sbjct: 77 APWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGG 136
Query: 441 KADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPA 620
ADK G TI +D + +T EP+GVCGQIIPWN+P M +WKIAPA+A G T++LK A
Sbjct: 137 WADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTA 196
Query: 621 EQTPLT 638
E TPL+
Sbjct: 197 ELTPLS 202
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 148 bits (358), Expect = 9e-37
Identities = 78/190 (41%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Frame = +3
Query: 105 LFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTMDA 284
L+IN EW S +T+ T++P E VI +V + +ID AV +AK+AF W+ +
Sbjct: 23 LYINGEWHK--SAETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAF---KTWKKVPG 77
Query: 285 SQRGXXXXXXXXXXXSQSRYLAELETLDCGKP-VKQSEEEVYFSASVLRYYAGKADKILG 461
S++G + LA +E +D GKP V + +V + ++LRY AG ADKI G
Sbjct: 78 SEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYG 137
Query: 462 NTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTX 641
IP+ E L + + P+GVCGQI+PWNYP+ M WKIAPALAAG +++K AE TPL+
Sbjct: 138 QVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSL 197
Query: 642 XXXXXXXKEA 671
+EA
Sbjct: 198 LYFATLVEEA 207
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 110 bits (264), Expect = 2e-25
Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 1/178 (0%)
Frame = +3
Query: 108 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTMDAS 287
+I +WV A S KTF NP + V + + A+ A +AF Y R D
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFLSY---RNSDIK 83
Query: 288 QRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNT 467
+R + LA + TL+ GK + ++ EV ++A + ++AG+A +I G++
Sbjct: 84 ERYAILRRWYDLIMENADDLATMMTLENGKALGDAKGEVVYAAKFIDWFAGEALRISGDS 143
Query: 468 -IPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 638
+ S+ + T+K+PVGV G I PWN+P M++ K+ ALAAGCTVV++PA +TP T
Sbjct: 144 SMSSNPQNRIITIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFT 201
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 108 bits (260), Expect = 7e-25
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Frame = +3
Query: 87 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSP 266
D + + F+ +W+ + + KTF NP +I +VA+ + A++AA +AF Y
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTYKN 73
Query: 267 WRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKA 446
+ + QR L ++ TL+ GKP+ Q+E EV + L++YA +A
Sbjct: 74 FTHV---QRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEA 130
Query: 447 DKILGNTIPSDGEVLTF--TMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPA 620
+ G+ PS + F ++K+PVGV I PWN+P M++ K ALAAGCT + PA
Sbjct: 131 VRTFGDVAPSSLQSQNFLISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPA 190
Query: 621 EQTPLTXXXXXXXXKEA 671
+TP +EA
Sbjct: 191 FRTPYVCLGLVRLAQEA 207
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 105 bits (253), Expect = 5e-24
Identities = 63/194 (32%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Frame = +3
Query: 105 LFINNEWVDAV--SKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTM 278
LFI+ ++V + + K P INP E +I A D+D AV A F R W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF-RSGIWAKW 81
Query: 279 DASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADK-- 452
QRG + LA ++T++CGKP + ++ A + YYA A+
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAETDN 141
Query: 453 -ILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQT 629
+ +P++ F + P GV G I PWN+P+ M WK+ PA+A+G VVLKP+E
Sbjct: 142 PTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELA 201
Query: 630 PLTXXXXXXXXKEA 671
P + KEA
Sbjct: 202 PWSCLEFALICKEA 215
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 49.2 bits (112), Expect = 6e-07
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Frame = +3
Query: 165 PQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWR-TMDASQRGXXXXXXXXXXXSQSR 341
P D +++ +V +K+DID ++ A++A W+ T A +R +Q +
Sbjct: 10 PGDGSLLGEVKLFNKSDIDQSIILAEEA---QKEWKSTSFAERRNFLKALKENIIRNQDK 66
Query: 342 YLAELETLDCGKP-VKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLT-----FTM 503
Y AE+ D GK V + E+ + + + ++ L T +LT +
Sbjct: 67 Y-AEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPT-KRPNSLLTSYKGGYVK 124
Query: 504 KEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQT 629
EP+GV ++ WNYP+ I AL AG +V+K +E T
Sbjct: 125 YEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELT 166
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.69
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 5/219 (2%)
Frame = -1
Query: 670 ASLTRAATASAVSGVCSAGFRTTVHPAA-KAGAIFQDXXXXXXXXXXX*PHTPTGSFMVN 494
+S T ++ + S S+ F +T+ ++ + + F +P+ S +
Sbjct: 298 SSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSS 357
Query: 493 VRTSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARYLDWDSRSSA 314
+S F + +S+ + STL +SSS P S SS + L SS+
Sbjct: 358 TTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSR-----PASS-SSHSSSLSSHKSSSS 411
Query: 313 SLSNRRPR*EASMVRHGE*RWNAFFAAATAKSISA---LSPSATCVMTVSSCGLMVGKVF 143
S S+ P A R ++ ++ + S+S+ L+ S++ ++T SS V+
Sbjct: 412 SKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKPILTASSSSLLTSSSHTYERSTVY 471
Query: 142 LLTASTHSLLINSLVYLT-STFTMLMIFLLIQSLSVSTS 29
++T T S S Y + ST T +++ ++ S S +S
Sbjct: 472 VVTVETVS--SGSSTYASQSTQTSILLVIVGDSSSTDSS 508
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -1
Query: 487 TSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARYLDWDSRSSASL 308
TS S + + S+ P ST++ +SSS + S +SSS+ + + SS+++
Sbjct: 284 TSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTI 343
Query: 307 SN 302
S+
Sbjct: 344 SS 345
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 108 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKAD 215
F+ D S+ TF TI PQ+ + E K+D
Sbjct: 224 FLQQSEADQPSEDTFTTIGPQNSLTVNSTIEKHKSD 259
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 235 AATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTST 83
+ +A +SA S + TC +S+ G LTA ++++ NS ST
Sbjct: 442 SGSATLVSASSATGTCASYLSAAGSSATNAISLTADSNAVSRNSSASTMST 492
>SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 508
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = -3
Query: 716 RTVSGNDIDNPRW-----KARFFDQGGNSERSQRCLFSWLQNN 603
+T+S D+D+P W K F +GG + S +F+ LQ N
Sbjct: 87 KTISTGDMDHPSWNSALEKLTSFLEGGEDDSSLGNMFNSLQIN 129
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 518 SVRSDNTVELPHTNDVLENSTSLSCRMYR--CSEAS*TN 628
SVR +NT +L D++E + R++R SEA+ N
Sbjct: 357 SVRDENTKKLKELQDIIEEQSKHMARLHREGFSEAAENN 395
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 245 SIPPLFPMAYHGRFSTR-PPIA*ASRTSRIPI*IP 346
S PP P A GR + PP+ ASRTS P+ P
Sbjct: 386 SNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 6.4
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -1
Query: 406 YTSSSDCFTGFPQSKVSSSARYLD-WDSRSSASLSNRRPR*EASMVRHGE*RWNAFFAAA 230
++S ++ TG+ + SS+ +S S S + P + + WN+ +AA
Sbjct: 115 FSSLANSVTGYASNYTQSSSNSTSTMNSTGSVSGGSVYP---TNSTTNSSISWNSSTSAA 171
Query: 229 TAKSISALSPSATCVMTVSS 170
T S S+ S S + V++V+S
Sbjct: 172 TNTSSSSSSSSQSSVVSVNS 191
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 6.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 386 TIRRRSILF-RKRAQIL--RWKSGQDIRKYHSFRRRSPYVHHEGACRSVRSDN 535
T+ + ++F KR Q L ++K+GQ +R+ + + YV+ E C++ D+
Sbjct: 543 TVHGKIVVFGEKRLQALTEKFKNGQLVRRDYRYWWTPVYVNQELRCKNAYCDS 595
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 8.5
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -1
Query: 373 PQSKVSSSARYLDWDSRSSASLSNRRPR*EASMVRHGE*RWNAFFAAATAKSISALSPSA 194
PQ K + + + + + S++ S P EA++ + FA T ++LS S
Sbjct: 38 PQRKAKTPSNHATEELQQSSTNSTTLPTQEAAVETNASASHETSFALPTTSPAASLSISP 97
Query: 193 TCVMTVSS 170
T VSS
Sbjct: 98 TKSAAVSS 105
>SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 413
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 734 KSTARCRTVSGNDIDNPRWKARFFDQGGNSERSQR 630
KS + T + ND D+P W+ R F + R QR
Sbjct: 353 KSPFKRSTGNTNDNDDPSWRFRLFVKKLLKNRDQR 387
>SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 133 LSAKKPSLPSTHKMKQS*HRSLKEIRRILIWPSPQQRK 246
+ PS S ++ S HR LK+ R IL SP++++
Sbjct: 1 MDTSPPSYDSHFTLETSMHRQLKDKRIILASGSPRRKQ 38
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,096,105
Number of Sequences: 5004
Number of extensions: 65927
Number of successful extensions: 210
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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