Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1m17
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023341-1|AAY55757.1|  109|Drosophila melanogaster IP02167p pro...    32   0.63 

>BT023341-1|AAY55757.1|  109|Drosophila melanogaster IP02167p
           protein.
          Length = 109

 Score = 32.3 bits (70), Expect = 0.63
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 304 WALRSL*RPMWTVRTVFWTMRALHA-EMFPVLWTMPVVLQAILWALWTLSVSMRTV 468
           W L++  R    + T++  +R L    +   LWT    ++ +LW LWTL   +RT+
Sbjct: 18  WLLKTTSRINHVLWTLWIVLRILLLWSLLWTLWTPMWAVRILLWTLWTLWTLLRTI 73



 Score = 31.1 bits (67), Expect = 1.5
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
 Frame = +1

Query: 292 LWPMW-ALRSL*--RPMWTVRTVFWTMRALHAEMFPVLWTMPVVLQAILWAL--WTLSVS 456
           LW +W  LR L     +WT+ T  W +R L       LWT+  +L+ I W L  W L ++
Sbjct: 30  LWTLWIVLRILLLWSLLWTLWTPMWAVRIL----LWTLWTLWTLLRTI-WQLLRWLLVLN 84

Query: 457 MRTVRPLR 480
            R  +P R
Sbjct: 85  ARNWQPNR 92



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +1

Query: 382 MFPVLWTMPVV--LQAILWALWTLSVSMRTVRPLRPMSFIWFV-PALWANAALWPEPSVW 552
           +F   W +     +  +LW LW +      +R L   S +W +   +WA   L     +W
Sbjct: 13  LFFFFWLLKTTSRINHVLWTLWIV------LRILLLWSLLWTLWTPMWAVRIL-----LW 61

Query: 553 AVYPLWSVLLTRWNMV 600
            ++ LW++L T W ++
Sbjct: 62  TLWTLWTLLRTIWQLL 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,585,714
Number of Sequences: 53049
Number of extensions: 369069
Number of successful extensions: 953
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)