Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1m06
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    26   0.93 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.9  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    24   3.8  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    24   3.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.0  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       23   6.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   6.6  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   6.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   8.7  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   8.7  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.7  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
 Frame = +3

Query: 282 KSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIENLNATKK---DKEVHL---VRPALR 443
           K  L EY+K  +  +         +L  T R ++E L+  +K   DK++ L   ++ A  
Sbjct: 207 KEELSEYQKWDKARRTLEYVIYETELKET-RKQLEELDGQRKSSGDKQLLLTQEIQKAQD 265

Query: 444 GIVEERAAARVGRFMLVTAWRRRRDEVRCLRKTLEFQVSCSERLRMQVSALKSLLDSDNV 623
            +   + A +  +  +VTA    +DE   L    +  +    +L + +S L   +  DN 
Sbjct: 266 RLKNAQKALKDAKKDVVTA----KDEKSVLATEHQQLLREKTKLDLTISDLSDEVQGDNK 321

Query: 624 KVRLAMRELDRLK 662
               A +EL+RLK
Sbjct: 322 SKERAEQELERLK 334


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 407 FLCCVQVFNFASFRG 363
           FL C++V NF S+RG
Sbjct: 9   FLQCIEVENFKSYRG 23


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 273 ARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIENLNATKKDKE 416
           AR+   + E + +  PP+ GH+    E      R +  +   TKK  E
Sbjct: 160 ARLSKLMQE-KTRNAPPERGHRCGRTESDNAKTRRRARHNTRTKKAAE 206


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 273 ARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIENLNATKKDKE 416
           AR+   + E + +  PP+ GH+    E      R +  +   TKK  E
Sbjct: 160 ARLSKLMQE-KTRNAPPERGHRCGRTESDNAKTRRRTRHNTRTKKAAE 206


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 54  EKMPENSPKMARSASPVARAGAGDISERELFRERHNLQTTPPA-RLQRL 197
           +++ EN P++ARS         GD  E         ++T PP   LQR+
Sbjct: 782 DRLVENYPRLARSVLFKVYQNTGDAHEVRCAAVYLLIRTKPPVYMLQRM 830


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 351 EDLTPTKRSKIENLNATKKDKEVH 422
           E+ +   R K ENLN  K  KE++
Sbjct: 296 EEASSYIRMKFENLNRRKDQKEIY 319


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 15/65 (23%), Positives = 26/65 (40%)
 Frame = -1

Query: 662 LQTVQLSHSETDLHVVRIQQRLKRRHLHAESFRARHLKLQSLPQAAHLVPPPAPGRHQHE 483
           L+  +L+  E  L  ++ QQ+ +  H   +   +   + Q  P + H  P      H H 
Sbjct: 230 LRDKELTEHE-QLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHH 288

Query: 482 PTHPG 468
             H G
Sbjct: 289 HQHGG 293


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 15/65 (23%), Positives = 26/65 (40%)
 Frame = -1

Query: 662 LQTVQLSHSETDLHVVRIQQRLKRRHLHAESFRARHLKLQSLPQAAHLVPPPAPGRHQHE 483
           L+  +L+  E  L  ++ QQ+ +  H   +   +   + Q  P + H  P      H H 
Sbjct: 230 LRDKELTEHE-QLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHH 288

Query: 482 PTHPG 468
             H G
Sbjct: 289 HQHGG 293


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 15/65 (23%), Positives = 26/65 (40%)
 Frame = -1

Query: 662 LQTVQLSHSETDLHVVRIQQRLKRRHLHAESFRARHLKLQSLPQAAHLVPPPAPGRHQHE 483
           L+  +L+  E  L  ++ QQ+ +  H   +   +   + Q  P + H  P      H H 
Sbjct: 182 LRDKELTEHE-QLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHH 240

Query: 482 PTHPG 468
             H G
Sbjct: 241 HQHGG 245


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 22/71 (30%), Positives = 26/71 (36%)
 Frame = -2

Query: 655 RSSSLIARRTFTLSESNRDLSADTCMRSRSEHDT*NSKVFLKQRTSSRRRRQAVTNMNRP 476
           RS SL           +R +S      SRS   T  S+   K RTS  R R  +      
Sbjct: 409 RSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLPARGH- 467

Query: 475 TRAAARSSTIP 443
            RA     TIP
Sbjct: 468 VRARLTRRTIP 478


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 131 RKRIIQRKTQLADNSARATSALTPQEAALL-DSREQIHRQETR 256
           ++ I   K +L DNS +   AL  Q AAL  + R Q    E +
Sbjct: 346 KQAIHVNKHRLRDNSHQLVDALERQRAALAQEERNQARAAEEK 388


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 342 ASMEDLTPTKRSKIENLNATKKDKEVHLVRPALRGIVEERAAARVGRF 485
           AS++D+TP +   I +  AT+K        P L GI      A +G +
Sbjct: 422 ASVDDVTPRELQDIAHQMATRK-------APGLDGIPNAAVKAAIGMY 462


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,960
Number of Sequences: 2352
Number of extensions: 14057
Number of successful extensions: 27
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)