Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1m05
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          50   6e-08
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.3  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   10.0 

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 50.4 bits (115), Expect = 6e-08
 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
 Frame = +3

Query: 384  LRFAASTNNTELVERLLKAGADPNCSDEHKRSPLHLAACRGYVDVVRILLRHGA---NPN 554
            L  A S N+  +V+ LL AGA  +  D    +PLH A      D+VR+LL  G    +  
Sbjct: 788  LHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQGGLRLDCT 847

Query: 555  NKDTLGNTPLHLAACTNHITVVIELLDAGTDVSSHD-RNGRNPIQLA 692
            N D  G T L  A    ++ +   LL+AG  V   D ++G N + +A
Sbjct: 848  NDD--GLTALQAAVYARNLKITRILLEAGASVREKDLKHGNNILHIA 892



 Score = 36.3 bits (80), Expect = 0.001
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +3

Query: 462  DEHKRSPLHLAACRGYVDVVRILLRHGANPNNKDTLGNTPLHLAACTNHITVV-IELLDA 638
            ++   + LHLA       +V+ LL  GA  +  D  GNTPLH A   N   +V + LL  
Sbjct: 781  NDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQG 840

Query: 639  GTDVSSHDRNGRNPIQLA 692
            G  +   + +G   +Q A
Sbjct: 841  GLRLDCTNDDGLTALQAA 858


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 174 SDNPVFDHSKCVLEFNLPAIPITQSGQPMPV 266
           S +PV D S+ V    +P++P+  S +P PV
Sbjct: 350 SISPVSDRSESVSP--VPSLPVRSSPEPSPV 378


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -3

Query: 269 LYWHWLTRLGYRNCWKIKF-QNTFRMI 192
           L+ HWLT      CW+    Q  +R++
Sbjct: 386 LFAHWLTTRPPTGCWETAIGQELYRLL 412


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,296
Number of Sequences: 2352
Number of extensions: 18285
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)