Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1l23
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ451401-1|ABD96829.1| 282|Homo sapiens RAD1 homolog (S. pombe)... 89 1e-17
BT006908-1|AAP35554.1| 282|Homo sapiens RAD1 homolog (S. pombe)... 89 1e-17
BC037857-1|AAH37857.1| 282|Homo sapiens RAD1 protein protein. 89 1e-17
BC009804-1|AAH09804.1| 282|Homo sapiens RAD1 homolog (S. pombe)... 89 1e-17
BC006837-1|AAH06837.1| 282|Homo sapiens RAD1 homolog (S. pombe)... 89 1e-17
AJ004974-1|CAA06248.1| 282|Homo sapiens cell cycle checkpoint p... 89 1e-17
AF084512-1|AAC35549.1| 282|Homo sapiens DNA repair exonuclease ... 89 1e-17
AF076841-1|AAC95523.1| 282|Homo sapiens Rad1-like protein protein. 89 1e-17
AF074717-1|AAC98093.1| 282|Homo sapiens Rad1-like DNA damage ch... 89 1e-17
AF073524-1|AAC95466.1| 282|Homo sapiens RAD1 protein. 89 1e-17
AF058392-1|AAC14138.1| 282|Homo sapiens cell cycle checkpoint p... 89 1e-17
AF030933-1|AAC95427.1| 282|Homo sapiens exonuclease homolog RAD... 89 1e-17
AF011905-1|AAC27243.1| 282|Homo sapiens HRAD1 protein. 89 1e-17
DQ530600-1|ABF72190.1| 140|Homo sapiens SWS1 protein. 66 2e-10
AF090170-1|AAC95603.1| 68|Homo sapiens Rad1-like protein protein. 60 1e-08
BC117180-1|AAI17181.1| 2527|Homo sapiens leucine-rich repeat kin... 31 4.4
AY792511-1|AAV63975.1| 2527|Homo sapiens leucine-rich repeat kin... 31 4.4
>DQ451401-1|ABD96829.1| 282|Homo sapiens RAD1 homolog (S. pombe)
protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>BT006908-1|AAP35554.1| 282|Homo sapiens RAD1 homolog (S. pombe)
protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>BC037857-1|AAH37857.1| 282|Homo sapiens RAD1 protein protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>BC009804-1|AAH09804.1| 282|Homo sapiens RAD1 homolog (S. pombe)
protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>BC006837-1|AAH06837.1| 282|Homo sapiens RAD1 homolog (S. pombe)
protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>AJ004974-1|CAA06248.1| 282|Homo sapiens cell cycle checkpoint
protein protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>AF084512-1|AAC35549.1| 282|Homo sapiens DNA repair exonuclease
protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>AF076841-1|AAC95523.1| 282|Homo sapiens Rad1-like protein protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>AF074717-1|AAC98093.1| 282|Homo sapiens Rad1-like DNA damage
checkpoint protein protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>AF073524-1|AAC95466.1| 282|Homo sapiens RAD1 protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>AF058392-1|AAC14138.1| 282|Homo sapiens cell cycle checkpoint
protein Hrad1 protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>AF030933-1|AAC95427.1| 282|Homo sapiens exonuclease homolog RAD1
protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>AF011905-1|AAC27243.1| 282|Homo sapiens HRAD1 protein.
Length = 282
Score = 89.4 bits (212), Expect = 1e-17
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGS----GEEASLKMYY 751
QA+A+I A F E+ V+++ V F+I+L VL +CL+IFGS G +L+M Y
Sbjct: 60 QANAFIQAGIFQEFKVQEE-SVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCY 112
>DQ530600-1|ABF72190.1| 140|Homo sapiens SWS1 protein.
Length = 140
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/109 (29%), Positives = 61/109 (55%)
Frame = +1
Query: 91 QISDEDLLALHSIFGVTLQRSLEILEKHPKFIIYTNPKGRTLIEVQGDNGRCYRVFPKIN 270
+I DE LL+L +FG + ++L+++++ +I ++P GR + +V G + + Y +
Sbjct: 25 RIPDEYLLSLKFLFGSSATQALDLVDRQSITLI-SSPSGRRVYQVLGSSSKTYTCLASCH 83
Query: 271 FCPCLAFKNLVIERKTEVTCKHVLAARLAQILERTSPHSVTHDQYLMLL 417
+C C AF V+ + + CKH+LA L+Q++ SV+ Q +L
Sbjct: 84 YCSCPAFAFSVLRKSDSILCKHLLAVYLSQVMRTCQQLSVSDKQLTDIL 132
>AF090170-1|AAC95603.1| 68|Homo sapiens Rad1-like protein protein.
Length = 68
Score = 59.7 bits (138), Expect = 1e-08
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2
Query: 422 PCLT*QKKMAEDSSQYHFTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCV 601
P LT +++ ++ QY AS+D+ + L ++LKAI F+E A A G+K+TVE KCV
Sbjct: 2 PLLT--QQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCV 59
Query: 602 QASAYI 619
QA+A+I
Sbjct: 60 QANAFI 65
>BC117180-1|AAI17181.1| 2527|Homo sapiens leucine-rich repeat kinase 2
protein.
Length = 2527
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 160 FPATFAKLHRIWNVKLTNLHLKFD 89
FP KL +IW++ L LHL FD
Sbjct: 1284 FPNEMGKLSKIWDLPLDELHLNFD 1307
>AY792511-1|AAV63975.1| 2527|Homo sapiens leucine-rich repeat kinase 2
protein.
Length = 2527
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 160 FPATFAKLHRIWNVKLTNLHLKFD 89
FP KL +IW++ L LHL FD
Sbjct: 1284 FPNEMGKLSKIWDLPLDELHLNFD 1307
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,285,420
Number of Sequences: 237096
Number of extensions: 2066213
Number of successful extensions: 3181
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3168
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -