Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1l23
         (751 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024410-1|ABC86472.1|  274|Drosophila melanogaster IP03973p pro...    66   4e-11
AF124501-1|AAD31690.1|  274|Drosophila melanogaster DNA repair p...    66   4e-11
AE014134-429|AAF51241.2|  274|Drosophila melanogaster CG3240-PA ...    66   4e-11
BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p pro...    31   1.3  
BT011057-1|AAR31128.1|  996|Drosophila melanogaster RE40649p pro...    31   1.3  

>BT024410-1|ABC86472.1|  274|Drosophila melanogaster IP03973p
           protein.
          Length = 274

 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 34/93 (36%), Positives = 57/93 (61%)
 Frame = +2

Query: 473 FTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCVQASAYIPADNFTEYHVR 652
           F A ++  KT    +K+I F +  +     +GL++TVE+GK +QA+ ++P   F E+ V+
Sbjct: 14  FVARVEHIKTFIQAIKSICFNDYGMVQVSEDGLRITVEQGKSIQATLFMPPGAFMEFRVQ 73

Query: 653 DDVDVIFKISLAVLAECLNIFGSGEEASLKMYY 751
           D     F + + VL+ECL++FGS  + SL+M Y
Sbjct: 74  D--FQCFGVKMNVLSECLSLFGSA-DCSLRMMY 103


>AF124501-1|AAD31690.1|  274|Drosophila melanogaster DNA repair
           protein Rad1 protein.
          Length = 274

 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 34/93 (36%), Positives = 57/93 (61%)
 Frame = +2

Query: 473 FTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCVQASAYIPADNFTEYHVR 652
           F A ++  KT    +K+I F +  +     +GL++TVE+GK +QA+ ++P   F E+ V+
Sbjct: 14  FVARVEHIKTFIQAIKSICFNDYGMVQVSEDGLRITVEQGKSIQATLFMPPGAFMEFRVQ 73

Query: 653 DDVDVIFKISLAVLAECLNIFGSGEEASLKMYY 751
           D     F + + VL+ECL++FGS  + SL+M Y
Sbjct: 74  D--FQCFGVKMNVLSECLSLFGSA-DCSLRMMY 103


>AE014134-429|AAF51241.2|  274|Drosophila melanogaster CG3240-PA
           protein.
          Length = 274

 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 34/93 (36%), Positives = 57/93 (61%)
 Frame = +2

Query: 473 FTASMDSGKTLCSLLKAIQFQESAVFCALPEGLKLTVEEGKCVQASAYIPADNFTEYHVR 652
           F A ++  KT    +K+I F +  +     +GL++TVE+GK +QA+ ++P   F E+ V+
Sbjct: 14  FVARVEHIKTFIQAIKSICFNDYGMVQVSEDGLRITVEQGKSIQATLFMPPGAFMEFRVQ 73

Query: 653 DDVDVIFKISLAVLAECLNIFGSGEEASLKMYY 751
           D     F + + VL+ECL++FGS  + SL+M Y
Sbjct: 74  D--FQCFGVKMNVLSECLSLFGSA-DCSLRMMY 103


>BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p
           protein.
          Length = 1037

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 503 LCSLLKAIQFQESAVFCALPEGLKLTVEEGKCVQASAYIP 622
           LC     I  +   + CA P GLKL V+   CV+   Y+P
Sbjct: 835 LCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDPLYLP 874


>BT011057-1|AAR31128.1|  996|Drosophila melanogaster RE40649p
           protein.
          Length = 996

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 503 LCSLLKAIQFQESAVFCALPEGLKLTVEEGKCVQASAYIP 622
           LC     I  +   + CA P GLKL V+   CV+   Y+P
Sbjct: 794 LCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDPLYLP 833


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,794,424
Number of Sequences: 53049
Number of extensions: 650756
Number of successful extensions: 1270
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)