Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1l23
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-31|CAD31831.2|  191|Caenorhabditis elegans Hypothetical...    36   0.031
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ...    33   0.22 
AF100675-2|AAC69004.1|  451|Caenorhabditis elegans Hypothetical ...    31   0.66 
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U61950-4|AAC24287.2|  303|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U88173-10|AAK21389.3|  390|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>AL132948-31|CAD31831.2|  191|Caenorhabditis elegans Hypothetical
           protein Y39B6A.40 protein.
          Length = 191

 Score = 35.9 bits (79), Expect = 0.031
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = +1

Query: 202 KGRTLIEVQGDNGRCYR--VFPKINFCPCLAFKNLVIERKTEVTCKHVLAARLAQ 360
           K R  IEV+    + Y   ++P +++C C  F++ V++++T   C H+LA   A+
Sbjct: 105 KQRCFIEVEHYKKKEYLNFLYPGVHYCTCPYFQSTVLQKQTNWICVHILAYYFAK 159


>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
            protein R155.3 protein.
          Length = 1165

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 229  GDNGRCYRVFPKINFCPCLAFKNLVIERKTEVTCKHVLAARLAQILERTSPHSVTHDQ 402
            G    C R +P+ +    + FKNL +E K+++  K      L    +   PH+VTH +
Sbjct: 896  GKTNSCARYYPE-SVGESMKFKNLTVECKSKIAEKDFETRELEVKFDGHEPHTVTHSR 952


>AF100675-2|AAC69004.1|  451|Caenorhabditis elegans Hypothetical
           protein Y55H10A.1 protein.
          Length = 451

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
 Frame = +2

Query: 563 EGLKLTVEEGK---CVQASAYIPADNFTEYHVRDDV--------DVIFKISLAVLAECLN 709
           EGL + VE+ K      A+AYIP  NFT  +   DV        D IFKI L +  +   
Sbjct: 210 EGLTVVVEQKKEKVLYYANAYIPGSNFTWAYSETDVTCPNGTIGDFIFKIHLTLENDITG 269

Query: 710 IFGSGEEA 733
           + G+ ++A
Sbjct: 270 MQGTSKKA 277


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = +2

Query: 554  ALPEGLKLTVEEGKCVQASAYIPADNFTEYHVRDDVDVIFKISLAVLAECLNIFGSGEEA 733
            ++ +GL+L VE GK ++  A + A    +  + D+V   FK+S+A +     +  +G ++
Sbjct: 3831 SIEDGLRLIVERGKAMENIAGLGALLAVQREIADEVLRKFKVSVATINSPKQVVFAGTKS 3890

Query: 734  SL 739
             L
Sbjct: 3891 VL 3892


>U61950-4|AAC24287.2|  303|Caenorhabditis elegans Hypothetical
           protein C45E5.1 protein.
          Length = 303

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = +2

Query: 503 LCSLLK--AIQFQESAVFCALPEGLKLTVEEGKCVQASAYIP--ADNFTEYHVRDDVDVI 670
           LC   K  + +F+   ++    E LK ++EEG  V+     P   DN+T+    ++VDV 
Sbjct: 89  LCDYFKQNSDKFENQYIYLIGVENLKKSLEEGGGVKCFGTGPDHKDNYTDGDFINEVDVK 148

Query: 671 FKISLAVL 694
            KI  AV+
Sbjct: 149 SKIPKAVV 156


>U88173-10|AAK21389.3|  390|Caenorhabditis elegans Hypothetical
           protein F46F11.10 protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = +1

Query: 13  TNKRNRPQTLN*HFQS-ESFNL*LRNYQISDEDLLALHSIFG-VTLQRSLEILEKHPKFI 186
           T  R  P     HF + +S N  +++ + S    +    +F  +  +  LE  E H K +
Sbjct: 195 TENRRNPDPFRLHFVNYDSKNSSIQDLEKSKLQSIRKSHVFNPIVTENGLETYENHSKNV 254

Query: 187 IYTNPKGRTLIEVQGDN 237
           IY +P     +E   D+
Sbjct: 255 IYLSPDATEELESVDDD 271


>Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical
           protein F21D9.5 protein.
          Length = 839

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 318 SFPFNNKVFESKTRTEVYFREHSI 247
           SFP + KVF S T    Y+R HSI
Sbjct: 585 SFPSSIKVFGSCTEMHGYYRNHSI 608


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,751,698
Number of Sequences: 27780
Number of extensions: 347435
Number of successful extensions: 694
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)