BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1l22
(456 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054508-1|AAH54508.1| 733|Homo sapiens erythrocyte membrane pr... 29 7.6
BC032822-1|AAH32822.1| 505|Homo sapiens EPB41L5 protein protein. 29 7.6
AK023019-1|BAB14360.1| 687|Homo sapiens protein ( Homo sapiens ... 29 7.6
AC016691-2|AAX88859.1| 533|Homo sapiens unknown protein. 29 7.6
BC120872-1|AAI20873.1| 1857|Homo sapiens maltase-glucoamylase (a... 29 10.0
AL359963-3|CAH71093.1| 518|Homo sapiens erythrocyte membrane pr... 29 10.0
AL359963-2|CAH71092.1| 900|Homo sapiens erythrocyte membrane pr... 29 10.0
AL358815-3|CAI15130.1| 518|Homo sapiens erythrocyte membrane pr... 29 10.0
AL358815-2|CAI15129.1| 900|Homo sapiens erythrocyte membrane pr... 29 10.0
AK000388-1|BAA91133.1| 440|Homo sapiens protein ( Homo sapiens ... 29 10.0
AF432202-1|AAL83560.1| 1734|Homo sapiens maltase-glucoamylase pr... 29 10.0
AF153418-1|AAG43368.1| 504|Homo sapiens FERM-containing protein... 29 10.0
AF153416-1|AAG43366.1| 913|Homo sapiens FERM-containing protein... 29 10.0
AF016833-1|AAC39568.2| 1857|Homo sapiens maltase-glucoamylase pr... 29 10.0
AB032179-1|BAA96079.2| 518|Homo sapiens EHM2 protein. 29 10.0
>BC054508-1|AAH54508.1| 733|Homo sapiens erythrocyte membrane
protein band 4.1 like 5 protein.
Length = 733
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ PF+ L
Sbjct: 116 LHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLDCPFDTAVQL 162
>BC032822-1|AAH32822.1| 505|Homo sapiens EPB41L5 protein protein.
Length = 505
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ PF+ L
Sbjct: 116 LHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLDCPFDTAVQL 162
>AK023019-1|BAB14360.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ12957 fis, clone NT2RP2005531, weakly similar to
PROTEIN 4.1. ).
Length = 687
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ PF+ L
Sbjct: 116 LHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLDCPFDTAVQL 162
>AC016691-2|AAX88859.1| 533|Homo sapiens unknown protein.
Length = 533
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ PF+ L
Sbjct: 116 LHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLDCPFDTAVQL 162
>BC120872-1|AAI20873.1| 1857|Homo sapiens maltase-glucoamylase
(alpha-glucosidase) protein.
Length = 1857
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -3
Query: 442 DPDFVNKVLCTDESTFKRDGYL----NLHNLHGWHTENP 338
D +K LC + DG L N+HNL+GW P
Sbjct: 1454 DRGLSSKTLCMESQQILPDGSLVQHYNVHNLYGWSQTRP 1492
>AL359963-3|CAH71093.1| 518|Homo sapiens erythrocyte membrane
protein band 4.1 like 4B protein.
Length = 518
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ P+E L
Sbjct: 158 LHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL 204
>AL359963-2|CAH71092.1| 900|Homo sapiens erythrocyte membrane
protein band 4.1 like 4B protein.
Length = 900
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ P+E L
Sbjct: 158 LHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL 204
>AL358815-3|CAI15130.1| 518|Homo sapiens erythrocyte membrane
protein band 4.1 like 4B protein.
Length = 518
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ P+E L
Sbjct: 158 LHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL 204
>AL358815-2|CAI15129.1| 900|Homo sapiens erythrocyte membrane
protein band 4.1 like 4B protein.
Length = 900
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ P+E L
Sbjct: 158 LHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL 204
>AK000388-1|BAA91133.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ20381 fis, clone KAIA2329. ).
Length = 440
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ P+E L
Sbjct: 80 LHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL 126
>AF432202-1|AAL83560.1| 1734|Homo sapiens maltase-glucoamylase
protein.
Length = 1734
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -3
Query: 442 DPDFVNKVLCTDESTFKRDGYL----NLHNLHGWHTENP 338
D +K LC + DG L N+HNL+GW P
Sbjct: 1331 DRGLSSKTLCMESQQILPDGSLVQHYNVHNLYGWSQTRP 1369
>AF153418-1|AAG43368.1| 504|Homo sapiens FERM-containing protein
protein.
Length = 504
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ P+E L
Sbjct: 144 LHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL 190
>AF153416-1|AAG43366.1| 913|Homo sapiens FERM-containing protein
protein.
Length = 913
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ P+E L
Sbjct: 144 LHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL 190
>AF016833-1|AAC39568.2| 1857|Homo sapiens maltase-glucoamylase
protein.
Length = 1857
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -3
Query: 442 DPDFVNKVLCTDESTFKRDGYL----NLHNLHGWHTENP 338
D +K LC + DG L N+HNL+GW P
Sbjct: 1454 DRGLSSKTLCMESQQILPDGSLVQHYNVHNLYGWSQTRP 1492
>AB032179-1|BAA96079.2| 518|Homo sapiens EHM2 protein.
Length = 518
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 373 LHNLHGWHTENPHLMREDRSQYQFKVNMWTGILNGQITGPFELTENL 233
LH +++ P+ +RE+ ++Y F + + IL+G++ P+E L
Sbjct: 158 LHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,025,668
Number of Sequences: 237096
Number of extensions: 1456343
Number of successful extensions: 2478
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2478
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -