Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1l18
         (365 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical p...    66   5e-12
U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in bl...    27   3.1  
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical...    27   4.1  
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical...    27   4.1  
AC084197-8|AAG23476.1|  228|Caenorhabditis elegans Hypothetical ...    27   5.4  

>Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical
           protein C16C10.11 protein.
          Length = 154

 Score = 66.5 bits (155), Expect = 5e-12
 Identities = 32/78 (41%), Positives = 43/78 (55%)
 Frame = +2

Query: 5   AVGHVAGSALTGMFSGGGXSEXXXXXXXXXXXXTYNQYQGQPAQGPCAWEIKQFLECAQQ 184
           A+G   G A+ GMF+GGG S                Q  G     PC +E +QF++CAQ 
Sbjct: 75  AIGSAVGHAVGGMFTGGGSSHAEQAPAAAAAPAGAPQASGYSQ--PCEFEWRQFVDCAQN 132

Query: 185 QHDLSLCDGFNEALRQCK 238
           Q D+SLC+GFN+  +QCK
Sbjct: 133 QSDVSLCNGFNDIFKQCK 150


>U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 10 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +2

Query: 107 YNQYQGQPAQGPCAWEIKQ---FLECAQQQHDLSLC 205
           Y Q Q  PAQ PCA + +Q      CA  Q D   C
Sbjct: 51  YTQVQQAPAQDPCACQPQQQQPACNCAPVQQDPCAC 86


>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
           protein Y105C5B.21b protein.
          Length = 1084

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 63  ASQPSNSKQLLQLKPTINT 119
           ASQPS +  ++ L+PT NT
Sbjct: 333 ASQPSETSDIIHLRPTCNT 351


>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
           protein Y105C5B.21a protein.
          Length = 1254

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 63  ASQPSNSKQLLQLKPTINT 119
           ASQPS +  ++ L+PT NT
Sbjct: 503 ASQPSETSDIIHLRPTCNT 521


>AC084197-8|AAG23476.1|  228|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.12 protein.
          Length = 228

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 341 EIKLSMIFFIKTIIFRAKLMDTSINLYSFRCG 246
           E+K S+IF  + II    L+D+ I + SFR G
Sbjct: 55  EVKKSVIFGFEHIIIIGLLLDSVILIRSFRFG 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,236,509
Number of Sequences: 27780
Number of extensions: 126804
Number of successful extensions: 254
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)