Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1l16
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U88178-4|AAC24411.1|  460|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AL132876-3|CAD21657.2|  746|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical protein
            C04A11.3 protein.
          Length = 1228

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/87 (24%), Positives = 40/87 (45%)
 Frame = +2

Query: 239  FKERIPEECEVFDKEQTLKLIESYLSRFDEELEQIALKNSIGQRKNRQHASREDVINMTR 418
            FKER+ +E ++F +E T+           +  EQI +++ + ++       +     + R
Sbjct: 923  FKERLKQEMKIFKQELTMLSKVQRKDALKQRKEQIEIEHQLKEKDFLMQLQQNAEAMLQR 982

Query: 419  KKEQDEFETCGIEIPDLMDPQQMNVLR 499
              E+ +     IE   LM  Q+ N+LR
Sbjct: 983  MAEKHKERMASIEKQFLM--QKHNLLR 1007


>Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical
           protein F47G4.2 protein.
          Length = 710

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 218 IGEKIMWFKERIPEECEVFDKEQTLKLIESYLSRFDEELEQIAL 349
           + EKI+       EEC+ + K   + ++ S + RFD E   I +
Sbjct: 505 VAEKILAATHNNEEECKRYIKHGAMNMLISAIDRFDSEPMHIVI 548


>U88178-4|AAC24411.1|  460|Caenorhabditis elegans Hypothetical
           protein W09C3.2 protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +2

Query: 266 EVFDKEQTLKLIESYLSRFDEELEQIALKNSIGQRKNRQHASRE 397
           +V D+EQ+ K+  S   R  + LEQ + + ++G+   R  +SR+
Sbjct: 115 KVEDQEQSRKIDRSIKDRNPKSLEQKSHQKNVGEGSKRTSSSRK 158


>AL132876-3|CAD21657.2|  746|Caenorhabditis elegans Hypothetical
           protein Y105E8A.3 protein.
          Length = 746

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 728 ALFIF*YSLYSSKICFEVVADTIL 657
           A+F+F    Y+  ICF+ VAD ++
Sbjct: 273 AVFVFVLDFYAESICFQHVADPVM 296


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,949,522
Number of Sequences: 27780
Number of extensions: 235117
Number of successful extensions: 742
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)