Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1l12
(726 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 103 2e-22
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 102 6e-22
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 100 2e-21
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 99 7e-21
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 97 2e-20
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 97 2e-20
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 97 3e-20
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 96 4e-20
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 96 5e-20
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 94 2e-19
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 92 6e-19
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 92 8e-19
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 91 2e-18
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 90 3e-18
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 88 1e-17
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 82 7e-16
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 81 2e-15
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 81 2e-15
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 81 2e-15
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 81 2e-15
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 81 2e-15
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 80 3e-15
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 80 3e-15
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 74 2e-13
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 72 7e-13
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 71 2e-12
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 71 2e-12
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 67 3e-11
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 66 3e-11
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 64 1e-10
AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p pro... 30 3.7
AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA... 30 3.7
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 103 bits (248), Expect = 2e-22
Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 9/152 (5%)
Frame = +2
Query: 296 ETP---KHSVYHYIET-NGPPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSP 463
ETP + + H I T + P+H ++ R P +VK + +M D I R S SPWS+P
Sbjct: 296 ETPLTFTNKITHSIPTIDNTPIHTKSYRYPFVHKTEVKKQIESMLDQQIIRSSHSPWSAP 355
Query: 464 LHVVPKK-----NGEIRPCGDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRA 628
+ VVPKK N + R DYR+LN T+ DRYP+P I D + K FS +D+
Sbjct: 356 VWVVPKKLDGTGNRKWRLVIDYRKLNDKTISDRYPIPNINDILDSIGKAKYFSTLDLTSG 415
Query: 629 YHYIPVWPEHIDKTAIITPFGLFEFPRMTFGL 724
+H I + P+ I KTA G +EF RM FGL
Sbjct: 416 FHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGL 447
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 102 bits (244), Expect = 6e-22
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 6/148 (4%)
Frame = +2
Query: 299 TPKHSVYHYIET-NGPPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVV 475
T +++ H I T + P+H ++ R P D+V+ + S M + I + S SPWS+P+ VV
Sbjct: 168 TFSNAIKHSIPTTDNIPIHTKSYRYPFVHKDEVRKQISKMLEQNIIKNSHSPWSAPVWVV 227
Query: 476 PKKNGEI-----RPCGDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYI 640
PKK+ I R D+R+LN TV DRYP+P I D + K + F+ ID+ +H I
Sbjct: 228 PKKSDNIGEKKWRLVIDFRKLNEKTVSDRYPIPNIADILDSIGKTMYFTTIDLASGFHQI 287
Query: 641 PVWPEHIDKTAIITPFGLFEFPRMTFGL 724
+ P KTA G +EF RM FGL
Sbjct: 288 QMNPRDASKTAFTVENGHYEFTRMPFGL 315
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 100 bits (239), Expect = 2e-21
Identities = 47/130 (36%), Positives = 77/130 (59%)
Frame = +2
Query: 335 NGPPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKKNGEIRPCGDY 514
N P RRL + D+++ + G RPS S ++SP+ +V KK G++R C D+
Sbjct: 713 NPKPFSCSPRRLSYTEKDRLQKLLDEYLENGFIRPSDSEYASPIVLVKKKTGDLRMCVDF 772
Query: 515 RRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITPFGL 694
R+LN +T+ D YPLP I D +++K +F+++D+ + ++ V E I T+ +TP G
Sbjct: 773 RKLNKMTMKDNYPLPLIDDLLDRMNEKTVFTKLDLKNGFFHVHVKKESIKYTSFVTPLGQ 832
Query: 695 FEFPRMTFGL 724
+E+ RM FGL
Sbjct: 833 YEWLRMPFGL 842
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 98.7 bits (235), Expect = 7e-21
Identities = 57/145 (39%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
Frame = +2
Query: 308 HSVYHYIET-NGPPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK 484
+ + H I+T + P+H ++ R P ++VK + M + I + S SPWS+P+ VVPKK
Sbjct: 189 NKITHTIKTTDDTPIHTKSYRYPYIHKEEVKKQIEAMLNQDIIKSSYSPWSAPVWVVPKK 248
Query: 485 ---NGEI--RPCGDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVW 649
GE R DYR+LN T+ DRYP+P I D L K FS +D+ +H I +
Sbjct: 249 ITPTGEQKWRLVIDYRKLNEKTISDRYPIPNIADILDRLGKAKYFSTLDLASGFHQIEMN 308
Query: 650 PEHIDKTAIITPFGLFEFPRMTFGL 724
P+ KTA G +EF RM FGL
Sbjct: 309 PDDTPKTAFTVEGGHYEFIRMPFGL 333
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 97.5 bits (232), Expect = 2e-20
Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 6/164 (3%)
Frame = +2
Query: 251 VISKYPNITKPACYRETPKHSVYHYIET-NGPPVHARARRLPPDKYDKVKSEFSTMHDLG 427
+I YP + + T SV I T + P++++ + P D+V + S + G
Sbjct: 163 IIDSYPGLFADPNQKLTYTTSVRAAIRTISDTPIYSKFYQYPMSLKDEVHKQISELLHDG 222
Query: 428 ICRPSRSPWSSPLHVVPKK-----NGEIRPCGDYRRLNAITVPDRYPLPRIQDFTYILDK 592
I RPSRSP++SP+ +VPKK + R DYR+LN +TV DRYP+P I + L
Sbjct: 223 IIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVIDYRKLNMVTVADRYPIPDINEVLAQLGD 282
Query: 593 KVIFSRIDVIRAYHYIPVWPEHIDKTAIITPFGLFEFPRMTFGL 724
IFS +D+ +H I + I+KTA G +EF R+ FGL
Sbjct: 283 NKIFSVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGL 326
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 97.5 bits (232), Expect = 2e-20
Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 6/164 (3%)
Frame = +2
Query: 251 VISKYPNITKPACYRETPKHSVYHYIET-NGPPVHARARRLPPDKYDKVKSEFSTMHDLG 427
+I YP + + T SV I T + P++++ + P D+V + S + G
Sbjct: 6 IIDSYPGLFADPNQKLTYTTSVRAAIRTISDTPIYSKFYQYPMSLKDEVHKQISELLHDG 65
Query: 428 ICRPSRSPWSSPLHVVPKK-----NGEIRPCGDYRRLNAITVPDRYPLPRIQDFTYILDK 592
I RPSRSP++SP+ +VPKK + R DYR+LN +TV DRYP+P I + L
Sbjct: 66 IIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVIDYRKLNMVTVADRYPIPDINEVLAQLGD 125
Query: 593 KVIFSRIDVIRAYHYIPVWPEHIDKTAIITPFGLFEFPRMTFGL 724
IFS +D+ +H I + I+KTA G +EF R+ FGL
Sbjct: 126 NKIFSVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGL 169
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 96.7 bits (230), Expect = 3e-20
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Frame = +2
Query: 251 VISKYPNITKPACYRETPKHSVYHYIET-NGPPVHARARRLPPDKYDKVKSEFSTMHDLG 427
+++K+ N+ + T +++ H + T + P++++ L +V+++ M + G
Sbjct: 174 LLNKFRNLEYKEGEKLTFTNTIKHVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQG 233
Query: 428 ICRPSRSPWSSPLHVVPKKN-----GEIRPCGDYRRLNAITVPDRYPLPRIQDFTYILDK 592
+ R S SP++SP VVPKK + R DYR+LN IT+PDRYP+P + + L K
Sbjct: 234 LIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGK 293
Query: 593 KVIFSRIDVIRAYHYIPVWPEHIDKTAIITPFGLFEFPRMTFGL 724
F+ ID+ + +H I + E I KTA T G +E+ RM FGL
Sbjct: 294 CQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGL 337
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 96.3 bits (229), Expect = 4e-20
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Frame = +2
Query: 308 HSVYHYIETN-GPPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK 484
++V H I T+ PV+ + P +V+++ M D GI R S SP+ SP+ VVPKK
Sbjct: 141 NNVKHTIRTSHNDPVYRKPYGYAPGLDTEVENQIKEMLDQGIIRESNSPYCSPIVVVPKK 200
Query: 485 ---NGE--IRPCGDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVW 649
+G+ R DYR LN IT+ D+YP+P + + L F+ ID+I+ +H I +
Sbjct: 201 PDISGQKKYRIAIDYRYLNEITIADKYPIPNMDEILSKLGGCNYFTTIDLIKGFHQIEMD 260
Query: 650 PEHIDKTAIITPFGLFEFPRMTFGL 724
PE I KTA T G +E+ RM FGL
Sbjct: 261 PESIPKTAFTTKTGHYEYTRMPFGL 285
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 95.9 bits (228), Expect = 5e-20
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 6/164 (3%)
Frame = +2
Query: 251 VISKYPNITKPACYRETPKHSVYHYIETNGP-PVHARARRLPPDKYDKVKSEFSTMHDLG 427
++ ++P I +P + + +V I TN P++A++ P + +V+ + + G
Sbjct: 91 LLGEFPRIFEPPLSGMSVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDG 150
Query: 428 ICRPSRSPWSSPLHVVPKK---NGE--IRPCGDYRRLNAITVPDRYPLPRIQDFTYILDK 592
I RPS SP++SP+ +VPKK NGE R D++RLN +T+PD YP+P I L
Sbjct: 151 IIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGN 210
Query: 593 KVIFSRIDVIRAYHYIPVWPEHIDKTAIITPFGLFEFPRMTFGL 724
F+ +D+ +H I + I KTA T G +EF R+ FGL
Sbjct: 211 AKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGL 254
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 94.3 bits (224), Expect = 2e-19
Identities = 52/136 (38%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Frame = +2
Query: 332 TNGPPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK---NGE--I 496
T+ PV+++ +V+ + M + GI R S SP+ SP+ VVPKK +G+ +
Sbjct: 165 THNIPVYSKMYSFQQSYEQEVERQIQEMLEQGIIRESSSPYCSPIWVVPKKLDASGQQKL 224
Query: 497 RPCGDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAI 676
R DYR+LN IT+ DRYP+P I + L + F+ ID+ + +H I + E I KTA
Sbjct: 225 RIVIDYRKLNEITINDRYPMPNIDEILGKLGRSNYFTTIDLAKGFHQIEMDSESIAKTAF 284
Query: 677 ITPFGLFEFPRMTFGL 724
T +G +E+ RM FGL
Sbjct: 285 STKYGHYEYTRMPFGL 300
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 92.3 bits (219), Expect = 6e-19
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Frame = +2
Query: 311 SVYHYIET-NGPPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK- 484
++ H I+T + PV+ + + P +V + M + GI R S+SP+ SP+ VVPKK
Sbjct: 268 TIKHVIQTQHEDPVYRKPYKYPQSVDQEVNKQIKEMIEQGIVRKSKSPYCSPIWVVPKKA 327
Query: 485 ----NGEIRPCGDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWP 652
+ R DYR LN ITV D++P+PR+ + L + F+ ID+ + +H I +
Sbjct: 328 DASGKQKFRLVVDYRNLNEITVNDKFPIPRMDEILDKLGRCQYFTTIDLAKGFHQIQMDE 387
Query: 653 EHIDKTAIITPFGLFEFPRMTFGL 724
I KTA T G +E+ RM FGL
Sbjct: 388 NSIAKTAFSTKHGHYEYTRMPFGL 411
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 91.9 bits (218), Expect = 8e-19
Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 7/165 (4%)
Frame = +2
Query: 251 VISKYPNITKPACYRETPKHSVYHYIET-NGPPVHARARRLPPDKYDK-VKSEFSTMHDL 424
++ KY +I + T + H I T + P++++ P Y++ V+S+ M +
Sbjct: 176 LLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSY--PQAYEQEVESQIQDMLNQ 233
Query: 425 GICRPSRSPWSSPLHVVPKKNG-----EIRPCGDYRRLNAITVPDRYPLPRIQDFTYILD 589
GI R S SP++SP+ VVPKK + R DYR+LN ITV DR+P+P + + L
Sbjct: 234 GIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLG 293
Query: 590 KKVIFSRIDVIRAYHYIPVWPEHIDKTAIITPFGLFEFPRMTFGL 724
+ F+ ID+ + +H I + PE + KTA T G +E+ RM FGL
Sbjct: 294 RCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGL 338
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 90.6 bits (215), Expect = 2e-18
Identities = 48/120 (40%), Positives = 70/120 (58%)
Frame = +2
Query: 347 VHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKKNGEIRPCGDYRRLN 526
V R RL P++ + V+ + S + I RPS SP++SP+ +V KKNG R C D+R LN
Sbjct: 458 VQRRPYRLSPEEREVVRMQVSELIRCNIVRPSCSPFASPMLLVKKKNGTDRLCVDFRELN 517
Query: 527 AITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITPFGLFEFP 706
+ T+ D+YPLP I D L F+ +D+ +H IP+ PE ++ TA + P GL P
Sbjct: 518 SNTISDKYPLPLISDQIARLRGANYFTCLDMASGFHQIPIHPESVEYTAFV-PDGLKNAP 576
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 89.8 bits (213), Expect = 3e-18
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Frame = +2
Query: 317 YHYIETNGPPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKKNGEI 496
+ I N P++++ + P D+V + + M D GI R S+SP++SPL VV KK +
Sbjct: 123 HRIITKNDLPIYSKTYKYPEIHKDEVNRQIAEMLDQGIIRHSKSPYNSPLWVVQKKMDQS 182
Query: 497 -----RPCGDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHI 661
R DYR+LN T+ DR+P+P I + L IFS +D+ + ++ I + + +
Sbjct: 183 NKQKWRLVVDYRKLNKETIEDRFPIPNIDEIFDKLGDCKIFSTLDLAKGFYQIEMDNKDV 242
Query: 662 DKTAIITPFGLFEFPRMTFGL 724
KTA T G +EF RM FGL
Sbjct: 243 HKTAFSTTSGHYEFLRMPFGL 263
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 88.2 bits (209), Expect = 1e-17
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Frame = +2
Query: 320 HYIET-NGPPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK---- 484
H I T + P++ R + P ++V+++ M GI R S SP+ SP+ VVPKK
Sbjct: 186 HVITTKHEDPIYRRPYKYPQSFDEEVENQMKDMIRQGIIRKSNSPYCSPVWVVPKKPDAS 245
Query: 485 -NGEIRPCGDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHI 661
+ R DYR LN ITV D+YP+P + + L F+ ID+ + +H I + I
Sbjct: 246 GKSKFRIVIDYRNLNEITVDDKYPIPVMDEILDKLGNCQYFTTIDLAKGFHQIQMDENSI 305
Query: 662 DKTAIITPFGLFEFPRMTFGL 724
KTA T G FE+ RM FGL
Sbjct: 306 AKTAFSTKNGHFEYTRMPFGL 326
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 82.2 bits (194), Expect = 7e-16
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
P++A+ P D V E + GI + S+SP+++P+ VV KK N ++R
Sbjct: 158 PIYAKLYPYPMGAADFVNGEIQELLKNGIIQKSKSPYNNPIWVVDKKGTDDAGNKKMRLV 217
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
D+R+LN TVPDRYP+P I L K F+ +D+ YH I + +KTA
Sbjct: 218 LDFRKLNERTVPDRYPMPNISMILGNLGKAKYFTTLDLKSGYHQITLAERDREKTAFAVN 277
Query: 686 FGLFEFPRMTFGL 724
G +EF R+ FGL
Sbjct: 278 GGKYEFRRLPFGL 290
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 80.6 bits (190), Expect = 2e-15
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
PV++RA D V +E + GI RPSRSP++SP VV KK N R
Sbjct: 161 PVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDASGNPNKRLV 220
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
D+R+LN T+PDRYP+P I L K F+ +D+ YH I + +KT+
Sbjct: 221 IDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVN 280
Query: 686 FGLFEFPRMTFGL 724
G +EF R+ FGL
Sbjct: 281 GGKYEFCRLPFGL 293
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 80.6 bits (190), Expect = 2e-15
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
PV++RA D V +E + GI RPSRSP++SP VV KK N R
Sbjct: 156 PVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLV 215
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
D+R+LN T+PDRYP+P I L K F+ +D+ YH I + +KT+
Sbjct: 216 IDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVN 275
Query: 686 FGLFEFPRMTFGL 724
G +EF R+ FGL
Sbjct: 276 GGKYEFCRLPFGL 288
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 80.6 bits (190), Expect = 2e-15
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
PV++RA D V +E + GI RPSRSP++SP VV KK N R
Sbjct: 191 PVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLV 250
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
D+R+LN T+PDRYP+P I L K F+ +D+ YH I + +KT+
Sbjct: 251 IDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVN 310
Query: 686 FGLFEFPRMTFGL 724
G +EF R+ FGL
Sbjct: 311 GGKYEFCRLPFGL 323
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 80.6 bits (190), Expect = 2e-15
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
PV++RA D V +E + GI RPSRSP++SP VV KK N R
Sbjct: 191 PVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLV 250
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
D+R+LN T+PDRYP+P I L K F+ +D+ YH I + +KT+
Sbjct: 251 IDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVN 310
Query: 686 FGLFEFPRMTFGL 724
G +EF R+ FGL
Sbjct: 311 GGKYEFCRLPFGL 323
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 80.6 bits (190), Expect = 2e-15
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
PV++RA D V +E + GI RPSRSP++SP VV KK N R
Sbjct: 609 PVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLV 668
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
D+R+LN T+PDRYP+P I L K F+ +D+ YH I + +KT+
Sbjct: 669 IDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVN 728
Query: 686 FGLFEFPRMTFGL 724
G +EF R+ FGL
Sbjct: 729 GGKYEFCRLPFGL 741
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 79.8 bits (188), Expect = 3e-15
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
PV++RA D V +E + GI RPSRSP++SP VV KK N R
Sbjct: 156 PVYSRAYPNLMGVSDFVNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLV 215
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
D+R+LN T+PDRYP+P I L K F+ +D+ YH I + +KT+
Sbjct: 216 IDFRKLNERTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVN 275
Query: 686 FGLFEFPRMTFGL 724
G +EF R+ FGL
Sbjct: 276 GGKYEFCRLPFGL 288
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 79.8 bits (188), Expect = 3e-15
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
PV++RA D V +E + GI RPSRSP++SP VV KK N R
Sbjct: 156 PVYSRAYPNLMGVSDFVNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLV 215
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
D+R+LN T+PDRYP+P I L K F+ +D+ YH I + +KT+
Sbjct: 216 IDFRKLNERTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVN 275
Query: 686 FGLFEFPRMTFGL 724
G +EF R+ FGL
Sbjct: 276 GGKYEFCRLPFGL 288
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 74.1 bits (174), Expect = 2e-13
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
PV+ + R+ + ++ + + D GI PS S ++SPL +VPKK R
Sbjct: 69 PVYIKNYRMADSQKPEIARQVKKLIDDGIVEPSMSEYNSPLLLVPKKPLPNSTEKRWRLA 128
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
DYR++N + D++PLPRI+D L + FS +D++ +H I + + D T+ T
Sbjct: 129 VDYRQINKKLLSDKFPLPRIEDILDQLGRAKYFSCLDLMSGFHQIELEKRYRDITSFSTA 188
Query: 686 FGLFEFPRMTFGL 724
G + F R+ +GL
Sbjct: 189 NGSYRFTRLPYGL 201
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 72.1 bits (169), Expect = 7e-13
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKK------NGEIRPC 505
P++++ P D V E + GI RPS SP+++P+ VV KK N + R
Sbjct: 187 PIYSKLYPYPMGVSDFVNKETHALLKDGIIRPSSSPYNNPVWVVDKKGTDEEGNTKKRLV 246
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
D+R+LN T+ D+YP+P + L K F+ +D+ A+H I + + KTA
Sbjct: 247 IDFRKLNLKTIDDKYPIPNVVWILSNLGKARFFTTLDLKSAFHQILLAEKDRAKTAFSVG 306
Query: 686 FGLFEFPRMTFGL 724
G +EF R+ FGL
Sbjct: 307 NGKYEFCRLPFGL 319
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 70.9 bits (166), Expect = 2e-12
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKKNG------EIRPC 505
PV+ + R P + ++++++ + I PS S ++SPL +VPKK+ + R
Sbjct: 314 PVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLV 373
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
DYR++N + D++PLPRI D L + FS +D++ +H I + D T+ T
Sbjct: 374 IDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTS 433
Query: 686 FGLFEFPRMTFGL 724
G + F R+ FGL
Sbjct: 434 NGSYRFTRLPFGL 446
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 70.9 bits (166), Expect = 2e-12
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKKNG------EIRPC 505
PV+ + R P + ++++++ + I PS S ++SPL +VPKK+ + R
Sbjct: 77 PVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLV 136
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
DYR++N + D++PLPRI D L + FS +D++ +H I + D T+ T
Sbjct: 137 IDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTS 196
Query: 686 FGLFEFPRMTFGL 724
G + F R+ FGL
Sbjct: 197 NGSYRFTRLPFGL 209
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 66.9 bits (156), Expect = 3e-11
Identities = 38/119 (31%), Positives = 62/119 (52%)
Frame = +2
Query: 365 RLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKKNGEIRPCGDYRRLNAITVPD 544
RL ++ VK + + I R S S +S + VV KK+G +R C DYR+LN + + D
Sbjct: 189 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVKKKDGTLRVCVDYRKLNTMVLMD 248
Query: 545 RYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITPFGLFEFPRMTFG 721
+P+P +++ L F+ +D+ + ++ V TA +T GLFEF + FG
Sbjct: 249 CFPVPIMEEVLEKLQSAKWFTTMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFG 307
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 66.5 bits (155), Expect = 3e-11
Identities = 38/119 (31%), Positives = 62/119 (52%)
Frame = +2
Query: 365 RLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKKNGEIRPCGDYRRLNAITVPD 544
RL ++ VK + + I R S S +S + VV KK+G +R C DYR+LN + + D
Sbjct: 495 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVRKKDGTLRVCVDYRKLNTMVLMD 554
Query: 545 RYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITPFGLFEFPRMTFG 721
+P+P +++ L F+ +D+ + ++ V TA +T GLFEF + FG
Sbjct: 555 CFPVPIMEEVLEKLQSAKWFTTMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFG 613
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 64.5 bits (150), Expect = 1e-10
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Frame = +2
Query: 344 PVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVPKKN------GEIRPC 505
P + + R P + ++ + + + + I P+ S ++SPL +VPKK+ + R
Sbjct: 208 PSYIKNYRTPHSQQAEISRQVTKLIEDKIVEPAVSEYNSPLLLVPKKSLPDSKEKKWRLV 267
Query: 506 GDYRRLNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHYIPVWPEHIDKTAIITP 685
DYR++N + D++PLPRI D L + FS +D++ +H I + + + T+ T
Sbjct: 268 IDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELEEDSRNITSFSTS 327
Query: 686 FGLFEFPRMTFGL 724
G + F R+ +GL
Sbjct: 328 SGSYRFTRLPYGL 340
>AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p
protein.
Length = 255
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 341 PPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVP 478
P +H R+ R P KV S+ + LG+CRP + S P +P
Sbjct: 145 PKIHRRSLRTLPLHPSKVCSKGNKSLGLGLCRPKPAKSSCPRFKMP 190
>AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA
protein.
Length = 255
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 341 PPVHARARRLPPDKYDKVKSEFSTMHDLGICRPSRSPWSSPLHVVP 478
P +H R+ R P KV S+ + LG+CRP + S P +P
Sbjct: 145 PKIHRRSLRTLPLHPSKVCSKGNKSLGLGLCRPKPAKSSCPRFKMP 190
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,526,436
Number of Sequences: 53049
Number of extensions: 670421
Number of successful extensions: 1337
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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