Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1l12
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               24   1.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.9  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   3.9  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   9.0  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/31 (32%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +2

Query: 146 KKLIDKITTLGIIA-SVVKCNELTLCSTDKN 235
           K ++  + TL I++  +V+C+++TLC   +N
Sbjct: 2   KTIVILLFTLCIVSYMMVRCDDITLCLKQEN 32


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = +2

Query: 290 YRETPKHSVYHYIETNGPPVHARARRLPPDKYDKVKSEFSTMHD 421
           YR   K   YH +  +   V    R     KYD+   E   +H+
Sbjct: 491 YRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYDEFGHEVDLVHN 534


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = +2

Query: 290 YRETPKHSVYHYIETNGPPVHARARRLPPDKYDKVKSEFSTMHD 421
           YR   K   YH +  +   V    R     KYD+   E   +H+
Sbjct: 491 YRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYDEFGHEVDLVHN 534


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = +2

Query: 290 YRETPKHSVYHYIETNGPPVHARARRLPPDKYDKVKSEFSTMHD 421
           YR   K   YH +  +   V    R     KYD+   E   +H+
Sbjct: 117 YRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYDEFGHEVDLVHN 160


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +2

Query: 521 LNAITVPDRYPLPRIQDFTYILDKKVIFSRIDVIRAYHY 637
           L A T   + P P   DF   L    IF+ I      HY
Sbjct: 261 LEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHY 299


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,310
Number of Sequences: 438
Number of extensions: 4967
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)