Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1l01
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069334-1|AAL39479.1|  629|Drosophila melanogaster LD04957p pro...    33   0.38 
AE013599-33|EAA45994.1|  629|Drosophila melanogaster CG17082-PF,...    33   0.38 
AE013599-32|EAA45995.1|  629|Drosophila melanogaster CG17082-PE,...    33   0.38 
AE013599-31|EAA45990.1|  629|Drosophila melanogaster CG17082-PD,...    33   0.38 
AE013599-30|EAA45993.1|  629|Drosophila melanogaster CG17082-PB,...    33   0.38 
AE013599-29|EAA45992.1|  629|Drosophila melanogaster CG17082-PA,...    33   0.38 
AE013599-28|EAA45991.2|  665|Drosophila melanogaster CG17082-PC,...    33   0.38 
U31961-18|AAA84417.1|  642|Drosophila melanogaster protein ( Dro...    32   0.87 
AY119141-1|AAM51001.1|  411|Drosophila melanogaster RE44625p pro...    32   0.87 
AE014297-2248|AAF55347.1|  630|Drosophila melanogaster CG10328-P...    32   0.87 
AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein...    30   3.5  
AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA...    30   3.5  
AE014296-396|AAF47598.1| 2517|Drosophila melanogaster CG11814-PA...    29   4.6  
AE014298-754|AAF46045.1|  640|Drosophila melanogaster CG15780-PA...    29   8.1  
AE014297-608|AAF54021.3|  965|Drosophila melanogaster CG1149-PA ...    29   8.1  

>AY069334-1|AAL39479.1|  629|Drosophila melanogaster LD04957p
           protein.
          Length = 629

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 321 LSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVED 467
           +SK ++  IL  L         +L R T+N+TV V TKS  +R  D+ D
Sbjct: 65  VSKKDLEPILTTLSKPHAEAIVQLVR-TLNKTVRVRTKSRPKRKPDIRD 112


>AE013599-33|EAA45994.1|  629|Drosophila melanogaster CG17082-PF,
           isoform F protein.
          Length = 629

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 321 LSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVED 467
           +SK ++  IL  L         +L R T+N+TV V TKS  +R  D+ D
Sbjct: 65  VSKKDLEPILTTLSKPHAEAIVQLVR-TLNKTVRVRTKSRPKRKPDIRD 112


>AE013599-32|EAA45995.1|  629|Drosophila melanogaster CG17082-PE,
           isoform E protein.
          Length = 629

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 321 LSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVED 467
           +SK ++  IL  L         +L R T+N+TV V TKS  +R  D+ D
Sbjct: 65  VSKKDLEPILTTLSKPHAEAIVQLVR-TLNKTVRVRTKSRPKRKPDIRD 112


>AE013599-31|EAA45990.1|  629|Drosophila melanogaster CG17082-PD,
           isoform D protein.
          Length = 629

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 321 LSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVED 467
           +SK ++  IL  L         +L R T+N+TV V TKS  +R  D+ D
Sbjct: 65  VSKKDLEPILTTLSKPHAEAIVQLVR-TLNKTVRVRTKSRPKRKPDIRD 112


>AE013599-30|EAA45993.1|  629|Drosophila melanogaster CG17082-PB,
           isoform B protein.
          Length = 629

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 321 LSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVED 467
           +SK ++  IL  L         +L R T+N+TV V TKS  +R  D+ D
Sbjct: 65  VSKKDLEPILTTLSKPHAEAIVQLVR-TLNKTVRVRTKSRPKRKPDIRD 112


>AE013599-29|EAA45992.1|  629|Drosophila melanogaster CG17082-PA,
           isoform A protein.
          Length = 629

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 321 LSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVED 467
           +SK ++  IL  L         +L R T+N+TV V TKS  +R  D+ D
Sbjct: 65  VSKKDLEPILTTLSKPHAEAIVQLVR-TLNKTVRVRTKSRPKRKPDIRD 112


>AE013599-28|EAA45991.2|  665|Drosophila melanogaster CG17082-PC,
           isoform C protein.
          Length = 665

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 321 LSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVED 467
           +SK ++  IL  L         +L R T+N+TV V TKS  +R  D+ D
Sbjct: 101 VSKKDLEPILTTLSKPHAEAIVQLVR-TLNKTVRVRTKSRPKRKPDIRD 148


>U31961-18|AAA84417.1|  642|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 642

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 14/69 (20%), Positives = 33/69 (47%)
 Frame = +3

Query: 318 NLSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVEDRRMPWSIFPE 497
           +L KS+   + + L+  E  +E ++      +   +  + LK+R +D E  ++ W +  +
Sbjct: 479 DLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREK 538

Query: 498 QLTQTEKAQ 524
           Q  +  K +
Sbjct: 539 QAEEIRKRE 547


>AY119141-1|AAM51001.1|  411|Drosophila melanogaster RE44625p
           protein.
          Length = 411

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 14/69 (20%), Positives = 33/69 (47%)
 Frame = +3

Query: 318 NLSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVEDRRMPWSIFPE 497
           +L KS+   + + L+  E  +E ++      +   +  + LK+R +D E  ++ W +  +
Sbjct: 248 DLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREK 307

Query: 498 QLTQTEKAQ 524
           Q  +  K +
Sbjct: 308 QAEEIRKRE 316


>AE014297-2248|AAF55347.1|  630|Drosophila melanogaster CG10328-PA
           protein.
          Length = 630

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 14/69 (20%), Positives = 33/69 (47%)
 Frame = +3

Query: 318 NLSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVEDRRMPWSIFPE 497
           +L KS+   + + L+  E  +E ++      +   +  + LK+R +D E  ++ W +  +
Sbjct: 467 DLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREK 526

Query: 498 QLTQTEKAQ 524
           Q  +  K +
Sbjct: 527 QAEEIRKRE 535


>AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein
           protein.
          Length = 1287

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +3

Query: 318 NLSKSEMSDILKALRNSECSVEEELTRQTINETVSVTTKSL 440
           N +K+ MS  +     SE S+E+ELTR++ ++ +++    L
Sbjct: 591 NYTKNNMSQYMDIAFTSERSIEDELTRESQSDVLTILVSYL 631


>AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA
           protein.
          Length = 1859

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 333 EMSDILKALRNSECSVEEEL-TRQTINETV 419
           E SD+L A+ N ECSV  E+  +Q   +TV
Sbjct: 843 EASDVLSAISNEECSVASEIFDKQDAGQTV 872


>AE014296-396|AAF47598.1| 2517|Drosophila melanogaster CG11814-PA
           protein.
          Length = 2517

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 357 LRNSECSVEEELTRQTINETVSVTTKSLKRRSIDVEDRRMPWSIFP 494
           +++ +CS + +L R  +N   S    + K  SI+V D  M   ++P
Sbjct: 780 IKSEKCSKDVQLLRSIVNNACSQVLITRKGDSINVNDNTMATLVYP 825


>AE014298-754|AAF46045.1|  640|Drosophila melanogaster CG15780-PA
           protein.
          Length = 640

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 543 LYKSLVFELFLSESIAQERYSRAFFYL 463
           LY+ LV +LF ++ +A+ER  +A  YL
Sbjct: 532 LYEHLVHQLFATDPLAEERLQQAQLYL 558


>AE014297-608|AAF54021.3|  965|Drosophila melanogaster CG1149-PA
           protein.
          Length = 965

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
 Frame = +3

Query: 141 NFYYSRIDLVPDSILQNFTLILLN*IKMIMEPSISSDDSCDSETRSMKKQLTEFGFEEEN 320
           N Y + I    +    N   I++N  K +    I+ D+   +  +S  + LT  GF+ EN
Sbjct: 135 NLYLNEIIEYINKTTDNVNEIIINAYKTVENQQIALDNLIFNG-KSHLRSLTFIGFQIEN 193

Query: 321 LSKSEMSDI--LKALRNSECSVEEELTRQTINETV 419
           LS    +    LK +  + C+V      +T+ +++
Sbjct: 194 LSTKPFAQFINLKRMVLTNCTVRNLTFLRTLQKSL 228


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,911,604
Number of Sequences: 53049
Number of extensions: 450471
Number of successful extensions: 1313
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)