Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k23
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0345 + 2484073-2485152                                           33   0.16 
11_06_0442 - 23622633-23623000,23623149-23623721,23624795-236253...    31   0.87 
01_07_0231 + 42176598-42178117,42178232-42179753                       31   1.2  
08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,435...    29   2.7  
04_02_0007 + 8464923-8465155,8466037-8466591,8466645-8467662,846...    28   8.1  
04_01_0619 - 8125611-8127967,8128449-8130123                           28   8.1  

>02_01_0345 + 2484073-2485152
          Length = 359

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +3

Query: 411 LPSTIPVRVHTNSEASVPDANLTETIPLPELMGEVKELEPVQREYEDLVNQLPR 572
           LPS +  +  T S A   D  + ETIPLP+ +   ++  P  R +E L+++ PR
Sbjct: 99  LPSMVEYKFWTKSFAVGDDLYVMETIPLPDKVDLGRDARP-GRSFEALIHREPR 151


>11_06_0442 -
           23622633-23623000,23623149-23623721,23624795-23625335,
           23625807-23625982,23626081-23626804
          Length = 793

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 471 NLTETIPLPELMGEVKELEPVQREYEDLVNQLPRDCSSIKG 593
           NL+E + +P  +GE  ELE V  E   L   +P   +++KG
Sbjct: 294 NLSEGLKIPTSLGECLELESVHLEGNFLQGSIPGSFANLKG 334


>01_07_0231 + 42176598-42178117,42178232-42179753
          Length = 1013

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 483 TIPLPELMGEVKELEPVQREYEDLVNQLPRDCSSIKGPAGTYLIH 617
           T P+P  M E+K+LE ++ EY +L  ++P+    I+      + H
Sbjct: 515 TGPIPVGMSELKKLEILRLEYNNLSGEIPQQLGGIESLLAVNVSH 559


>08_01_0501 +
           4345522-4345720,4346598-4347167,4347294-4347366,
           4351133-4353092,4353465-4353840,4353932-4354326,
           4354597-4354765,4355444-4355518,4357699-4357826,
           4357988-4358213,4358290-4358417,4358505-4358768
          Length = 1520

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 498 ELMGEVKELEPVQREYEDLVNQLPRDCSSIKGP 596
           E++  V+EL+P+Q+E+ D V +L  D      P
Sbjct: 109 EMLETVEELDPLQKEWRDTVRELAYDIEDCIDP 141


>04_02_0007 +
           8464923-8465155,8466037-8466591,8466645-8467662,
           8467768-8468485,8468651-8468937
          Length = 936

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +3

Query: 408 NLPSTIPVRVHTNSEASVPDANLTETIPLPELMGEVKELEPVQREYEDLVNQLPRDC 578
           NL   IP    +N+   V  +    + PLPE    +  LE +   Y +    +P DC
Sbjct: 494 NLTGQIPESFGSNNMQQVNLSRNELSGPLPEFFRRMTMLELLDLSYNNFEGPIPTDC 550


>04_01_0619 - 8125611-8127967,8128449-8130123
          Length = 1343

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/43 (23%), Positives = 24/43 (55%)
 Frame = +3

Query: 489 PLPELMGEVKELEPVQREYEDLVNQLPRDCSSIKGPAGTYLIH 617
           P+P  +G +  L+ +  +  +L  Q+P++ + ++   G +L H
Sbjct: 795 PIPSALGNLSNLDTLGLQSCNLTGQIPQELAQLRKIKGLFLDH 837


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,627,283
Number of Sequences: 37544
Number of extensions: 221350
Number of successful extensions: 564
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)