Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1k22
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0726 + 31514480-31514932 35 0.061
09_04_0347 + 16887182-16888504 30 1.7
06_03_0680 - 23470292-23470384,23470499-23470606,23471145-234713... 29 4.0
05_04_0110 + 18058821-18058900,18059119-18059182,18059351-180594... 29 4.0
03_06_0235 + 32539025-32539886,32540330-32540473,32540595-325407... 29 4.0
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 29 4.0
12_01_0450 - 3552701-3552865,3552971-3553195,3553306-3553473,355... 29 5.3
10_08_0600 - 19098312-19099439 28 7.0
10_01_0240 - 2506901-2507008,2507950-2508322,2508418-2508612,250... 28 7.0
08_01_0039 + 284948-285301 28 7.0
04_04_1040 - 30325669-30325728,30325837-30326454,30326566-30326895 28 7.0
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 28 9.3
11_06_0064 + 19733643-19734056 28 9.3
10_08_0002 - 13986969-13989338 28 9.3
06_02_0365 + 15190841-15190988,15191296-15191754,15192692-151927... 28 9.3
03_02_0921 + 12414932-12416569 28 9.3
>01_06_0726 + 31514480-31514932
Length = 150
Score = 35.1 bits (77), Expect = 0.061
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = -1
Query: 470 SLWQAGSGGGGHASRKQSAEILSRALEFYSTPPSPCTTW--HS*WYNILPS*ARK----- 312
S W + SG GG R+ SA + R+L+ SP W H W +L A++
Sbjct: 34 SSWPSLSGAGGTGRRRGSAVV--RSLQLVVRDVSPAAGWCGHRAWRRLLRRLAQETRCIC 91
Query: 311 *SAS*EISASDKPITDRSGPASIETNFD 228
S+S +AS +PIT AS NFD
Sbjct: 92 SSSSPSGAASSRPITFGYDAASYAKNFD 119
>09_04_0347 + 16887182-16888504
Length = 440
Score = 30.3 bits (65), Expect = 1.7
Identities = 36/97 (37%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Frame = -1
Query: 458 AGSGGGGHASRKQSAEILSRALEFYSTPPSPCTTWHS*WYN-----ILPS*-ARK*SAS* 297
A + GG AS AE + A + + PSP T N PS A SA+
Sbjct: 16 AAAAAGGSASEGSDAEASAEAARGHGSSPSPSKTPPPANPNPKSAAAPPSAVAAPASAAG 75
Query: 296 EIS--ASDKPIT--DRSGPASIETNFDSEISEFPSGS 198
S ASD P + SGP SIE N DSE S P S
Sbjct: 76 SDSGAASDSPRAAGNPSGPRSIEVNSDSEDSALPLAS 112
>06_03_0680 -
23470292-23470384,23470499-23470606,23471145-23471368,
23473628-23473859
Length = 218
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 527 FLEAIVASRQQSRLICH*SSLWQAGSGGGGHASRKQSAEILS-RALEFY 384
+LE + A + ICH +++ A + GG +K S IL+ + LEFY
Sbjct: 119 YLEEL-AEKDSQAFICHFYNVYFAHTAGGRMIGKKVSENILNKKELEFY 166
>05_04_0110 +
18058821-18058900,18059119-18059182,18059351-18059437,
18059521-18059598,18060105-18060201,18060817-18060860,
18061071-18061257,18061324-18061406
Length = 239
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 446 GGGHASRKQSAEILSRALEF 387
GGGH + K S ILSR LEF
Sbjct: 81 GGGHKANKCSEHILSRLLEF 100
>03_06_0235 +
32539025-32539886,32540330-32540473,32540595-32540747,
32540871-32540986,32541254-32541421,32541534-32541758,
32541884-32542015
Length = 599
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +1
Query: 574 NDGRITFAHFARILNFIGV-LVSPEDFNLLVRRFIKDSYTLDYVEFLKA---VEAVQKEG 741
N G+ITF L +G L E + L+ + +S T+DY EF+ A + +++E
Sbjct: 450 NSGQITFEELKVGLKKVGANLQESEIYALMQAADVDNSGTIDYGEFIAATLHMNKIERED 509
Query: 742 H 744
H
Sbjct: 510 H 510
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -1
Query: 290 SASDKPITDRSGPASIETNFDSEISEFPSGSRGRYQSQRLRPTRKAA--ARILLHVFQTS 117
+ +P RSG ++ S S RG+ +S RP +AA A +++ F +
Sbjct: 1210 AVQSQPAPKRSGDGGSSSDSGSSKEGGSSSDRGKSESNGNRPGPEAAIIAGMVIGFFTFA 1269
Query: 116 AKRTIVSCILNSDALCTPPN 57
IV+C+ S PP+
Sbjct: 1270 LLLAIVACVCCSKKKKRPPH 1289
>12_01_0450 -
3552701-3552865,3552971-3553195,3553306-3553473,
3554514-3554629,3554735-3554887,3554978-3555121,
3556667-3557276
Length = 526
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 574 NDGRITFAHFARILNFIGV-LVSPEDFNLLVRRFIKDSYTLDYVEFLKAVEAVQK 735
N G IT+ L +G L+ PE L+ I +S T+DY EFL A + K
Sbjct: 366 NSGTITYDELKNGLKRVGSDLMEPEIQALMDAADIDNSGTIDYGEFLAATLHMNK 420
>10_08_0600 - 19098312-19099439
Length = 375
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +1
Query: 502 LLATIASRNLPLKPYFQDYEMVAKNDGRITFAHFARILNFIGVLVSPEDFNLLVRRFIKD 681
LLA ASR+LPL+ F+ + +A D + A N + +P + N + + D
Sbjct: 122 LLAMSASRSLPLRAVFRVWRELALPDD-FEVSVVADHPNLFHLAPNPAEPNTHILHLVAD 180
Query: 682 SYTLDYVEFLKAVEAVQKEGH 744
T EF AV+ + E H
Sbjct: 181 PAT---EEFTPAVDKTRPEKH 198
>10_01_0240 -
2506901-2507008,2507950-2508322,2508418-2508612,
2508771-2508885,2510027-2510132,2510253-2510366,
2510521-2510538
Length = 342
Score = 28.3 bits (60), Expect = 7.0
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 484 IRRLCCLLATIASRNLPLKPYFQDYEMVAKN--DGRITFAHFARILNFIGVLVSPEDFNL 657
++ L C+ AS L E+V KN D R++ RI+ F+G V E
Sbjct: 72 VKFLACMHGLEASGEANLTATLNIAELVLKNRPDKRLS----QRIVVFVGSPVKDEKLET 127
Query: 658 LVRRFIKDSYTLDYVEF 708
+ ++ K + +LD VEF
Sbjct: 128 IGKKLKKYNVSLDVVEF 144
>08_01_0039 + 284948-285301
Length = 117
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 512 VASRQQSRLICH*SSLWQAGSGGGGHASRK 423
VA R++ R C W AG GGGG AS +
Sbjct: 17 VARRRRHRRSCGDVGGWWAGVGGGGKASMR 46
>04_04_1040 - 30325669-30325728,30325837-30326454,30326566-30326895
Length = 335
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 619 FIGVLVSPEDFNLLVRRFIKDSYTLDYVEFLKAVEAVQKEGHP 747
F+G LVSP+ + V ++++ Y E+LK +EA + E P
Sbjct: 236 FVGYLVSPKFAHRFVG-YLEEEAVSSYTEYLKDLEAGKIENTP 277
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 562 MVAKNDGRITFAHFARILNFIGV-LVSPEDFNLLVRRFIKDSYTLDYVEFLKA---VEAV 729
M N G+I + L +G + E + L+ I +S T+DY EF+ A + V
Sbjct: 463 MDTDNSGQINYEELKAGLERVGANMKESEIYQLMQAADIDNSGTIDYGEFIAATLHLNKV 522
Query: 730 QKEGH 744
++E H
Sbjct: 523 EREDH 527
>11_06_0064 + 19733643-19734056
Length = 137
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 482 CH*SSLWQAGSGGGGH-ASRKQSAEILSRALEFY 384
C SSLW S GGH A R++ + R L+ Y
Sbjct: 54 CCLSSLWHGSSTAGGHGALRRKRSSAARRPLQVY 87
>10_08_0002 - 13986969-13989338
Length = 789
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 432 GMSSSAGTGLP*ARSVANQTTLLPTSYNSFEESTFETLFSGL 557
G S + G GL A +AN L P ++FE E+L GL
Sbjct: 11 GESGNGGAGLGLAAFIANGEDLGPIVRHAFESGKPESLLQGL 52
>06_02_0365 +
15190841-15190988,15191296-15191754,15192692-15192782,
15192902-15193003,15193126-15193228,15193548-15193685,
15193912-15193974,15195042-15195124,15196312-15196411,
15196640-15196717,15196834-15196941,15197987-15198067,
15200179-15200220,15200221-15200283,15200426-15200482
Length = 571
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 478 WQIRRLCCLLATIASRNLPLKPYFQDYE 561
WQ+ ++ LLA IAS +P + YE
Sbjct: 531 WQVSKVAALLAPIASSGMPTTLQYPPYE 558
>03_02_0921 + 12414932-12416569
Length = 545
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/73 (20%), Positives = 36/73 (49%)
Frame = +1
Query: 529 LPLKPYFQDYEMVAKNDGRITFAHFARILNFIGVLVSPEDFNLLVRRFIKDSYTLDYVEF 708
LP++ + +++ ++DG +T + + IL+ + + + L R + T D +
Sbjct: 107 LPVEERVKVLDLLQRDDGALTVSDYNDILSALAMAGDHDSAVALFRALRPNGVTPDAQSY 166
Query: 709 LKAVEAVQKEGHP 747
AV+ + ++G P
Sbjct: 167 ATAVQCLCRKGAP 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,822,426
Number of Sequences: 37544
Number of extensions: 450647
Number of successful extensions: 1605
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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