BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1k22
(758 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058348-1|AAL13577.1| 728|Drosophila melanogaster GH12158p pro... 142 6e-34
AE014297-1704|AAF54962.2| 728|Drosophila melanogaster CG10841-P... 142 6e-34
BT023526-1|AAY84926.1| 301|Drosophila melanogaster IP09951p pro... 29 6.9
AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P... 29 6.9
AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB... 29 9.1
AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA... 29 9.1
>AY058348-1|AAL13577.1| 728|Drosophila melanogaster GH12158p
protein.
Length = 728
Score = 142 bits (343), Expect = 6e-34
Identities = 77/209 (36%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Frame = +1
Query: 106 VRLADVWKTCNKIRAAAFRVGLNLWDWYRPLDPEGNSLISESKFVSILAGPLRSVIGLSD 285
+ L +W+ C KI+ A FR ++ + DP + +SE F ++L G R V GLS+
Sbjct: 15 MELNQIWRGCRKIQGAIFRYNFDICADLKQHDPCCSGFVSEPIFTAVL-GKYRKVAGLSE 73
Query: 286 AEISQLADYFRAQDGRILYHQLCQVVHGEGGVL*NSNARDKISADCFLXXXXXXXXXXXH 465
+E+ + DYF+ +DGR+ Y Q C+VV E + A+ ++
Sbjct: 74 SELRDVTDYFQIRDGRVAYRQFCKVVCSE---TLHKTAKSDLATGLEWNDPWHVNVVPQP 130
Query: 466 KLDQWQIRRLCCLLATIASR-NLPLKPYFQDYEMVAKNDGRITFAHFARILNFIGVLVSP 642
+ D+ RRLC +L IA N+PL PYFQDYE++A+N G +T AHF+R+L+F+ + +S
Sbjct: 131 E-DR---RRLCLILLKIAQLCNIPLMPYFQDYELIAQNVGVVTVAHFSRVLHFMKIPLSE 186
Query: 643 EDFNLLVRRFIKDSYTLDYVEFLKAVEAV 729
DF LL+RR++KD Y ++YV FLK ++ +
Sbjct: 187 SDFLLLLRRYMKDGYLVNYVAFLKHIDNI 215
Score = 29.1 bits (62), Expect = 6.9
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1
Query: 196 LDPEGNSLISESKFVSILAGPLRSVIGLSDAEISQLADYFRAQDGRIL 339
LDPE +SE V IL R + S A I + DY R ++G IL
Sbjct: 503 LDPED---VSEEVIVRILTNAKRQAVVKSVAVIEFMKDYDRHREGEIL 547
>AE014297-1704|AAF54962.2| 728|Drosophila melanogaster CG10841-PA
protein.
Length = 728
Score = 142 bits (343), Expect = 6e-34
Identities = 77/209 (36%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Frame = +1
Query: 106 VRLADVWKTCNKIRAAAFRVGLNLWDWYRPLDPEGNSLISESKFVSILAGPLRSVIGLSD 285
+ L +W+ C KI+ A FR ++ + DP + +SE F ++L G R V GLS+
Sbjct: 15 MELNQIWRGCRKIQGAIFRYNFDICADLKQHDPCCSGFVSEPIFTAVL-GKYRKVAGLSE 73
Query: 286 AEISQLADYFRAQDGRILYHQLCQVVHGEGGVL*NSNARDKISADCFLXXXXXXXXXXXH 465
+E+ + DYF+ +DGR+ Y Q C+VV E + A+ ++
Sbjct: 74 SELRDVTDYFQIRDGRVAYRQFCKVVCSE---TLHKTAKSDLATGLEWNDPWHVNVVPQP 130
Query: 466 KLDQWQIRRLCCLLATIASR-NLPLKPYFQDYEMVAKNDGRITFAHFARILNFIGVLVSP 642
+ D+ RRLC +L IA N+PL PYFQDYE++A+N G +T AHF+R+L+F+ + +S
Sbjct: 131 E-DR---RRLCLILLKIAQLCNIPLMPYFQDYELIAQNVGVVTVAHFSRVLHFMKIPLSE 186
Query: 643 EDFNLLVRRFIKDSYTLDYVEFLKAVEAV 729
DF LL+RR++KD Y ++YV FLK ++ +
Sbjct: 187 SDFLLLLRRYMKDGYLVNYVAFLKHIDNI 215
Score = 29.1 bits (62), Expect = 6.9
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1
Query: 196 LDPEGNSLISESKFVSILAGPLRSVIGLSDAEISQLADYFRAQDGRIL 339
LDPE +SE V IL R + S A I + DY R ++G IL
Sbjct: 503 LDPED---VSEEVIVRILTNAKRQAVVKSVAVIEFMKDYDRHREGEIL 547
>BT023526-1|AAY84926.1| 301|Drosophila melanogaster IP09951p
protein.
Length = 301
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 505 LATIASRNLPLKPYFQDYEMVAKNDG 582
LA S P K FQD+ VAKNDG
Sbjct: 33 LAARGSHAQPYKSVFQDFVTVAKNDG 58
>AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC
protein.
Length = 1884
Score = 29.1 bits (62), Expect = 6.9
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +1
Query: 106 VRLADVW--KTCNKIRAAAFRVGLNLWDWYRPLDPE-GNSLISESKFV 240
VR AD+ ++ K+RA F VG DW R +DP G+ ++++KF+
Sbjct: 1833 VRWADIEEKRSQKKMRAIGFVVGQT--DWNRMMDPNAGSRALNKTKFI 1878
>AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB,
isoform B protein.
Length = 3966
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 446 GGGHASRKQSAEILSRALEFYSTPPSPCTTW--HS*WYNIL 330
G G + A +++ A E + PP+P TW + W N+L
Sbjct: 3230 GTGQVEMRHFAHLVTNAKESTNIPPNPDPTWITETVWLNVL 3270
>AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA,
isoform A protein.
Length = 3868
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 446 GGGHASRKQSAEILSRALEFYSTPPSPCTTW--HS*WYNIL 330
G G + A +++ A E + PP+P TW + W N+L
Sbjct: 3179 GTGQVEMRHFAHLVTNAKESTNIPPNPDPTWITETVWLNVL 3219
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,036,249
Number of Sequences: 53049
Number of extensions: 724670
Number of successful extensions: 2429
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2427
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -