Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k21
         (692 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849...    28   8.1  

>02_02_0277 +
           8489717-8491468,8491571-8491610,8491719-8491841,
           8491959-8492014
          Length = 656

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 527 GRGYKSDYTLWRPAVLKLNGFVQKSRCFQHYFIWLFTRPV 408
           G GY ++  L+  A  K    +  SR  +H F W+F +PV
Sbjct: 302 GAGYDAEQRLYSHAFKKSMSLL--SRLMKHKFGWVFNKPV 339


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,618,301
Number of Sequences: 37544
Number of extensions: 289101
Number of successful extensions: 445
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)