Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k15
         (350 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0511 + 18435745-18436499,18436624-18436742,18436788-184373...    27   5.5  
10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558...    26   7.2  
10_01_0036 + 427678-428029,431043-431968                               26   7.2  
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232...    26   9.6  

>10_08_0511 +
           18435745-18436499,18436624-18436742,18436788-18437372,
           18438534-18438667,18439128-18439148,18439656-18439739,
           18439832-18440077,18440763-18440925,18441024-18441066,
           18441392-18441773,18442212-18442267,18442351-18442417,
           18442542-18442721
          Length = 944

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 142 MLNYGNKLDSLCDKNFLSKLMQVLH 216
           + +Y N L+ LCD+N   + +++LH
Sbjct: 158 VFSYNNLLNGLCDENRSQEALELLH 182


>10_02_0129 +
           5584585-5584732,5586567-5586968,5587038-5587106,
           5587181-5587234,5587309-5588214,5588313-5590283,
           5590833-5591235,5591845-5591857
          Length = 1321

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 115 ELCFYLFMKMLNYGNKLDSLCDKNFLSKLMQVLHPKTHKKRF*KLAVHADL 267
           EL FY     LN+  +     D+  + +L++VLH   + + F  LA   DL
Sbjct: 372 ELYFYDDDPSLNHRFRRSPSLDQEVVRRLVEVLHGNPYSQTFRSLAQADDL 422


>10_01_0036 + 427678-428029,431043-431968
          Length = 425

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 76  RIRKISMFWAPNKELCFYL 132
           R R  ++F+AP++++C YL
Sbjct: 248 RCRTAALFYAPHRQVCLYL 266


>10_08_0495 - 18318028-18320399,18322450-18322981,18323097-18323200,
            18323653-18323701,18323979-18324119,18324889-18324957,
            18325048-18325137,18325301-18326251,18326831-18327502
          Length = 1659

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 142  MLNYGNKLDSLCDKNFLSKLMQVLH 216
            + +Y N L  LCD+N   + +++LH
Sbjct: 1040 VFSYNNLLKGLCDENRSQEALELLH 1064


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,151,588
Number of Sequences: 37544
Number of extensions: 117070
Number of successful extensions: 228
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)