Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k15
         (350 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin...    32   0.13 
AF067618-3|AAC19196.1|  430|Caenorhabditis elegans Proteasome re...    29   0.94 
AC024801-6|AAP86611.1|  197|Caenorhabditis elegans Hypothetical ...    28   1.6  
AF067613-12|AAN73861.1|  467|Caenorhabditis elegans Hypothetical...    27   3.8  
Z75529-8|CAA99788.2|  350|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U50068-8|AAB37739.1|  865|Caenorhabditis elegans Hypothetical pr...    26   8.7  
AF016452-19|AAB66008.1|  344|Caenorhabditis elegans Acyltransfer...    26   8.7  
AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical ...    26   8.7  
AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin...    26   8.7  
AC024785-1|AAF60598.2|  466|Caenorhabditis elegans C-type lectin...    26   8.7  

>AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin
           protein 74 protein.
          Length = 467

 Score = 31.9 bits (69), Expect = 0.13
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 223 FLDVKLASTSIKNFCHRVNPICFHNLAFS*TNKNIILYLA 104
           F+  +L   + +N+CH  NP+ F NLA+   +K    YLA
Sbjct: 34  FMPYQLTYNASRNYCHHNNPVGFSNLAYV-PDKETSNYLA 72


>AF067618-3|AAC19196.1|  430|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 5 protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 0.94
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 175 CDKNFLSKLMQVLHPKTHKKRF*KLAVH 258
           CDK     +  V+ P THK RF  L +H
Sbjct: 182 CDKQIQELIEAVVLPMTHKDRFVNLGIH 209


>AC024801-6|AAP86611.1|  197|Caenorhabditis elegans Hypothetical
           protein Y50D7A.11 protein.
          Length = 197

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 79  IRKISMFWAPNKELCFYLFMKMLNYGNKLDSLCDKNFLSKLMQ 207
           + KI++  +  K LC    +  L +GN +DS C K   S   Q
Sbjct: 102 VAKITVAMSARKNLCVNEPVAALRFGNTVDSACQKLTASSARQ 144


>AF067613-12|AAN73861.1|  467|Caenorhabditis elegans Hypothetical
           protein F56D6.2 protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = -2

Query: 232 FC-EFLDVKLASTSIKNFCHRVNPICFHNLAF---S*TNKNIILY 110
           FC +F+  K+A    +N+CH  NP+    LA      TN N+ +Y
Sbjct: 30  FCFKFVVQKMAYNDARNWCHYQNPVGPSYLAVVGNKETNNNLAVY 74


>Z75529-8|CAA99788.2|  350|Caenorhabditis elegans Hypothetical
           protein C44H9.8 protein.
          Length = 350

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 186 FFIEVDASFTSKNSQKEILKTSGPR*PPTHG 278
           FF+ + A F  K  ++   + SGP  PP  G
Sbjct: 264 FFVLITAVFLMKFEKRSCKRNSGPSEPPHQG 294


>U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical
           protein T22F3.3b protein.
          Length = 846

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 100 WAPNKELCFYLFMKMLNYGNKLDSLCDKNFLSKLMQVLHP 219
           W+   E  F+L  K  N G+ + ++ D+N    + +VL+P
Sbjct: 243 WSAKAENHFHL--KFFNDGDYVQAVMDRNLSENITRVLYP 280


>U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical
           protein T22F3.3a protein.
          Length = 882

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 100 WAPNKELCFYLFMKMLNYGNKLDSLCDKNFLSKLMQVLHP 219
           W+   E  F+L  K  N G+ + ++ D+N    + +VL+P
Sbjct: 279 WSAKAENHFHL--KFFNDGDYVQAVMDRNLSENITRVLYP 316


>U50068-8|AAB37739.1|  865|Caenorhabditis elegans Hypothetical
           protein C01G5.8 protein.
          Length = 865

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 97  FWAPNKELCFYLFMKMLNYGNK 162
           FW P+  + FY F+++L+ G K
Sbjct: 242 FWLPSDIITFYRFVELLSEGAK 263


>AF016452-19|AAB66008.1|  344|Caenorhabditis elegans
           Acyltransferase-like protein 8 protein.
          Length = 344

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +1

Query: 67  KSIRIRKISMFWAPNKELCFYLFMKMLNYGNKL----DSLCDKNFLSKLMQVLHPKTHKK 234
           K +  R +  +    K+    LF +  + G +     D+  DKN L +   VLHP+T   
Sbjct: 143 KPVLERIVKYYSGSEKKYQILLFAEGTDKGERATRLSDAFADKNGLPRYEYVLHPRTTGF 202

Query: 235 RF 240
           +F
Sbjct: 203 KF 204


>AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical
           protein F38A1.4 protein.
          Length = 435

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 226 EFLDVKLASTSIKNFCHRVNPICFHNLAF 140
           +F+  ++  T  +N+CH  NP+    LA+
Sbjct: 48  KFVSQQMTFTDARNWCHYQNPVTSSYLAY 76


>AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin
           protein 71 protein.
          Length = 467

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 232 FC-EFLDVKLASTSIKNFCHRVNPI 161
           FC +F+  K+  T  +N+CH  NP+
Sbjct: 30  FCFKFVVQKMTYTDARNWCHYQNPV 54


>AC024785-1|AAF60598.2|  466|Caenorhabditis elegans C-type lectin
           protein 70 protein.
          Length = 466

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 232 FC-EFLDVKLASTSIKNFCHRVNPICFHNLAF 140
           FC +F+  ++  T  +N+CH  NP+    LA+
Sbjct: 31  FCFKFVAQQMTYTDARNWCHYKNPVGSSYLAY 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,143,718
Number of Sequences: 27780
Number of extensions: 135063
Number of successful extensions: 288
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)