Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1k13
(733 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 201 7e-53
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 122 4e-29
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 119 4e-28
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 118 1e-27
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 94 2e-20
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 92 6e-20
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 91 2e-19
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 90 3e-19
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 85 1e-17
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 83 3e-17
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 83 5e-17
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 81 2e-16
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 48 2e-06
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 33 0.032
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 27 2.1
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 4.8
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 26 4.8
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 25 8.4
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 201 bits (491), Expect = 7e-53
Identities = 90/103 (87%), Positives = 94/103 (91%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
Y GGVFFL+IHFPTDYPFKPPKV FTTRIYHPNINSNGSICLDILR QWSPALTISKVLL
Sbjct: 45 YAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLL 104
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM 309
SICSLL DPNPDDPLVPEIA +YKTDR +Y AREWTRKYA+
Sbjct: 105 SICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYAI 147
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 122 bits (295), Expect = 4e-29
Identities = 51/103 (49%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN-GSICLDILRAQWSPALTISKVL 177
Y+GG F + I P DYPF+PPK+ F T+IYHPN++S G+ICLDIL+ QWSP T+ L
Sbjct: 48 YEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSAL 107
Query: 178 LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
+S+ SLLC P P +P ++A++Y + +++ AREWT YA
Sbjct: 108 ISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYA 150
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 119 bits (287), Expect = 4e-28
Identities = 53/103 (51%), Positives = 70/103 (67%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
Y+GG F L + P +YP PP V F T+IYHPN++ G ICL L+ WSPAL I VLL
Sbjct: 46 YEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLL 105
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM 309
SI +L+ PNPDDPL ++A+I+K + + AREWT+KYA+
Sbjct: 106 SIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 118 bits (283), Expect = 1e-27
Identities = 50/103 (48%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ-WSPALTISKVL 177
Y GG F ++ FP DYPF+PP + FTTRIYHPN +S G++CL IL+ Q + P++ + VL
Sbjct: 51 YAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVL 110
Query: 178 LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
I LL +PNPDDPLV IA Y+ DR ++++AR++ ++A
Sbjct: 111 EQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 94.3 bits (224), Expect = 2e-20
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ--WSPALTISKV 174
++GG++ LT+ FP +YP +PPK FT ++HPN+ +G++CL IL + W PA+TI ++
Sbjct: 53 WEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQI 112
Query: 175 LLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
LL I LL DPN P E ++K D+ +Y + R R+ A
Sbjct: 113 LLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 156
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 92.3 bits (219), Expect = 6e-20
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRAQWSPALTISKVL 177
Y+GG + L IH YP PP V F T+I HPNI+ +NG +C+DIL+ WSPA ++
Sbjct: 49 YEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSAC 108
Query: 178 LSICSLLCDPNPDDPLVPEIARIYKT-DREKYNELAREWTRKYA 306
L+I SLL + + PL + A++ +T D+ YN L R T YA
Sbjct: 109 LAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYA 152
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 90.6 bits (215), Expect = 2e-19
Identities = 37/93 (39%), Positives = 61/93 (65%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
Y+G F +++ FP +YP+ PP + FT+ ++HPN++ +G+ICLDIL+ +WS + +LL
Sbjct: 73 YEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILL 132
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNEL 279
S+ SLL +PN PL + A ++ D +Y L
Sbjct: 133 SLQSLLGEPNNASPLNAQAAELWSKDPIEYKRL 165
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 90.2 bits (214), Expect = 3e-19
Identities = 38/96 (39%), Positives = 61/96 (63%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
++ G F L + F YP KPP V F + ++HPN+ +NG +CLDIL+ +WSP ++ +L
Sbjct: 48 FEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILT 107
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 288
SI SLL DPN P E A++++ ++++Y R+
Sbjct: 108 SIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRK 143
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 85.0 bits (201), Expect = 1e-17
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 13/113 (11%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRA------------- 141
++GG++ T+ FP+DYP PP + F +HPN+ +G++C+ IL A
Sbjct: 50 FEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSE 109
Query: 142 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 300
+WSP ++ K+LLS+ S+L +PN + + ++++ DRE+Y + R RK
Sbjct: 110 RWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 83.4 bits (197), Expect = 3e-17
Identities = 37/95 (38%), Positives = 53/95 (55%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
Y+GG F I +YP PPKV +IYHPNI+ G++CL+ILR W+P L ++ +L+
Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILV 124
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR 285
+ L PN +DPL E A D + + R
Sbjct: 125 GLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVR 159
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 82.6 bits (195), Expect = 5e-17
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 13/113 (11%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------A 141
Y+GG F T+ FP DYP PPK+ FTT I+HPN++ NG +C+ IL
Sbjct: 50 YEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGE 109
Query: 142 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 300
+W P + +L+S+ S+L PN + P + A+ ++ + +++ + R R+
Sbjct: 110 RWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRR 162
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 81.0 bits (191), Expect = 2e-16
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRAQWSPALTISKVL 177
Y GG++ + + P++YP+K P + F RI+HPNI+ +GS+CLD++ WSP + +
Sbjct: 44 YSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIF 103
Query: 178 -LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
+ + LL PN DPL E A + + Y R++ +YA
Sbjct: 104 EVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYA 147
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 47.6 bits (108), Expect = 2e-06
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISK 171
Y+GG + T+ FP DYPFKPP + T +N +CL D W+P+ +S
Sbjct: 49 YEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHPKSWNPSWMVST 106
Query: 172 VLLSICSLL-CDPNPDDPLV--PEIARIYKTDREKYN 273
+L+ + S + D +V R Y D +++N
Sbjct: 107 ILVGLVSFMTSDEITTGGIVTSESTRRTYAKDTKRFN 143
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 33.5 bits (73), Expect = 0.032
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSI---CLDILRAQWSPALTIS 168
++ ++ L IH +YP PP V F +RI P ++ G + +D LR W ++
Sbjct: 53 HENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLR-HWKREYSME 111
Query: 169 KVLLSI 186
VLL +
Sbjct: 112 TVLLDL 117
Score = 25.4 bits (53), Expect = 8.4
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Frame = +1
Query: 127 DILRAQWS-----PALTISKVLLSICSLLCDPN-PD-DPLVPEIARIYK--TDRE--KYN 273
DI + W+ PA ++ + + + CD N PD P+V ++RI D E K N
Sbjct: 35 DITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVN 94
Query: 274 ----ELAREWTRKYAM**VNCDINKTYTHTSPQPGLYPP 378
+ R W R+Y+M V D+ K +S + PP
Sbjct: 95 PHKIDCLRHWKREYSMETVLLDLKKEMASSSNRKLPQPP 133
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +1
Query: 151 PALTISKVLLSICSLLCDPNPDD---PLVPEIARIYKTD 258
PA++I LL++ + NP D P+V +I RI+K+D
Sbjct: 344 PAVSIDGTLLNVGDWVLIRNPADSSKPIVSQIYRIWKSD 382
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 4.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 40 TDYPFKPPKVAFTTRIYHPNINSN 111
TD FKP + T +++P+I +N
Sbjct: 113 TDKKFKPNDTSITANVFNPSIQNN 136
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 145 WSPALTISKVLLSICSLLCDPNPDDPLVPEI 237
+SPA I KVL + L DPN + P++P+I
Sbjct: 291 FSPAPFIQKVLSRL--LPSDPNVEMPMIPQI 319
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 25.4 bits (53), Expect = 8.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 502 FKNANLLHLSKYKNTHVQTLFLSSLVRKFSVRSIFL 609
+K L LSK TH+ + FLS L F SIFL
Sbjct: 75 YKGDKRLVLSKVLITHIISAFLSFLSAIFVFFSIFL 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,953,927
Number of Sequences: 5004
Number of extensions: 63618
Number of successful extensions: 200
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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