Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1k13
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 224 4e-59
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 224 4e-59
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 118 6e-27
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 107 6e-24
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 106 1e-23
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 96 2e-20
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 96 2e-20
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 89 2e-18
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 88 7e-18
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 82 5e-16
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 81 6e-16
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 81 1e-15
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 80 1e-15
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 80 1e-15
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 79 2e-15
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 71 6e-13
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 64 7e-11
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 57 1e-08
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 55 5e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 51 1e-06
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 42 6e-04
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 41 8e-04
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 31 0.84
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 31 1.1
AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormo... 30 1.5
Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane p... 29 3.4
Z92829-13|CAB07344.2| 337|Caenorhabditis elegans Hypothetical p... 29 4.5
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 28 7.8
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 28 7.8
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 224 bits (548), Expect = 4e-59
Identities = 99/103 (96%), Positives = 103/103 (100%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALTISKVLL
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLL 104
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM 309
SICSLLCDPNPDDPLVPEIARIYKTDRE+YN+LAREWT+KYAM
Sbjct: 105 SICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 147
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 224 bits (548), Expect = 4e-59
Identities = 99/103 (96%), Positives = 103/103 (100%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALTISKVLL
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLL 104
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM 309
SICSLLCDPNPDDPLVPEIARIYKTDRE+YN+LAREWT+KYAM
Sbjct: 105 SICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 147
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 118 bits (283), Expect = 6e-27
Identities = 53/102 (51%), Positives = 70/102 (68%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
+ GGVF L + P +YP PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I VLL
Sbjct: 48 FAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLL 107
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
SI +LL PNP+DPL ++A +KT+ + + A++WT YA
Sbjct: 108 SIQALLSAPNPEDPLATDVAEQWKTNEAEAIKTAKQWTMNYA 149
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 107 bits (258), Expect = 6e-24
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ-WSPALTISKVL 177
Y G F + I FP DYPFKPPKVAF T+IYHPN++ G CL I+ A+ W PA +V+
Sbjct: 46 YNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVM 105
Query: 178 LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
+++ SL+ +P P P+ ++A ++ D +K+ + A E TRK+A
Sbjct: 106 MALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHA 148
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 106 bits (255), Expect = 1e-23
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN-GSICLDILRAQWSPALTISKVL 177
Y GG+F L I P YPF PP V F+T+I+HPN++S G ICLDIL+ QW+ +LT+ VL
Sbjct: 51 YAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVL 110
Query: 178 LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
LSI +L+C P P DP +A+ Y + A WT K+A
Sbjct: 111 LSIQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFA 153
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 96.3 bits (229), Expect = 2e-20
Identities = 39/96 (40%), Positives = 66/96 (68%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
++ G F L++ F +YP KPP V F ++++HPN+ ++GSICLDIL+ +WSP ++ +L
Sbjct: 48 FEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILT 107
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 288
SI SLL +PNP+ P A++Y+ +R +Y + ++
Sbjct: 108 SIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQ 143
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 96.3 bits (229), Expect = 2e-20
Identities = 39/96 (40%), Positives = 66/96 (68%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 180
++ G F L++ F +YP KPP V F ++++HPN+ ++GSICLDIL+ +WSP ++ +L
Sbjct: 48 FEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILT 107
Query: 181 SICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 288
SI SLL +PNP+ P A++Y+ +R +Y + ++
Sbjct: 108 SIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQ 143
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 89.4 bits (212), Expect = 2e-18
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 13/113 (11%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRA------------- 141
+ GVF I FP DYP PPK+ FT I+HPNI ++G +C+ IL A
Sbjct: 49 FANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNE 108
Query: 142 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 300
+WSP +I K+LLS+ S+L +PN + P A++++ DR ++ ++A RK
Sbjct: 109 RWSPVQSIEKILLSVVSMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRK 161
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 87.8 bits (208), Expect = 7e-18
Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 16/118 (13%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVA---------------FTTRIYHPNINSN-GSICLDI 132
Y GG F + + P YPF+PPKV F TRI+HPNI+S G+ICLDI
Sbjct: 65 YAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDI 124
Query: 133 LRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
L+ +W+ +LT+ VLLS+ ++LC P P DP +A+ + + + A WT +A
Sbjct: 125 LKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFA 182
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRAQWSPALTISKVL 177
Y+ GV+ + + P YPFK P + F +I+HPNI+ ++G++CLD++ W+ ++ +
Sbjct: 47 YENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYDLTNIF 106
Query: 178 -LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
+ LL PN DPL E AR+Y E+Y RE+ ++A
Sbjct: 107 DTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFA 150
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 13/101 (12%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRA------------- 141
YQGG F +I FP++YP+ PP + FTT+++HPN+ NG +C+ IL +
Sbjct: 54 YQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACE 113
Query: 142 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE 264
+W+P ++ +LLS+ SLL +PN P + + +Y+ +E
Sbjct: 114 RWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMYRKWKE 154
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL-DILRAQWSPALTISKV 174
Y+GG+F L I YPFK P V F T+I+HP+++ +G+ICL D+ W ++TI KV
Sbjct: 393 YEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVSMTIYKV 452
Query: 175 LLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
L+ I S + + N +P+ EI +RE + + A WT+++A
Sbjct: 453 LIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFA 496
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RAQWSPALTISKV 174
++GG++ + + F D+P PPK F ++HPN+ +G++CL +L W P+++I ++
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 175 LLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
L+ I LL PN +DP E +IY +R +Y + ++ KYA
Sbjct: 113 LIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RAQWSPALTISKV 174
++GG++ + + F D+P PPK F ++HPN+ +G++CL +L W P+++I ++
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 175 LLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 306
L+ I LL PN +DP E +IY +R +Y + ++ KYA
Sbjct: 113 LIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 79.4 bits (187), Expect = 2e-15
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL-------------RA 141
Y+GG F + FP DYP KPPK+ F + I+HPNI+ G++C+ IL
Sbjct: 48 YEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEE 107
Query: 142 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 288
+W P T+ +LLS+ S+L DPN + P + A K RE Y E ++
Sbjct: 108 RWLPVHTVETILLSVISMLTDPNFESPANVDAA---KMQRENYAEFKKK 153
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 71.3 bits (167), Expect = 6e-13
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ------WSPALT 162
Y+GG F I P +Y PP V T+++HPNIN +GSICL ILR W P
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRN 131
Query: 163 ISKVLLSICSLLCD-PNPDDPLVPEIARIYKTDREKYNELAREWTRKY 303
++ V+ + SL D + +D L + A+++ +RE +N RE+ +Y
Sbjct: 132 LTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/68 (50%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFT--TRIYHPNINSNGSICLDILRAQWSPALTISKV 174
Y G VF L F YPF P+V F T HP+I SNG ICL IL W+PAL++ V
Sbjct: 50 YAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSV 109
Query: 175 LLSICSLL 198
LSI S+L
Sbjct: 110 CLSILSML 117
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 64.5 bits (150), Expect = 7e-11
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLD-ILRAQWSPALTISKV 174
Y+ +F LT+ +YPFKPP + F +YHPN++ +C +L+ W P T+ V
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDV 116
Query: 175 LLSICSLLCDPNPDDPLVPEIARIYKTDR----EKYNELAREW 291
LL++ LL +P+ P+ + A Y ++ +K ELA++W
Sbjct: 117 LLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTELAKKW 159
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ-WSPALTISKVL 177
++GG + ++++F +P PP F T ++HPN++ GSI L +L + WS ++ K+L
Sbjct: 83 WEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQEHWSSETSLKKLL 141
Query: 178 LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR--EWT 294
I +LL P+ E Y+ RE Y AR WT
Sbjct: 142 REISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWT 182
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 55.2 bits (127), Expect = 5e-08
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTR-----IYHPNINSNGSICLDIL-------RAQ 144
Y G+F I FPT YPF PPK AF T ++PN+ ++G ICL IL +
Sbjct: 457 YANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEK 516
Query: 145 WSPALTISKVLLSI 186
W+P ++ +VL+SI
Sbjct: 517 WNPYCSLMQVLVSI 530
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ---WSPALTISK 171
Y+GG++ + FP D+PFKPP + T + +N +CL I W+PA T+S
Sbjct: 52 YEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVST 109
Query: 172 VLLSICSLLCDPNP 213
++ + S + D P
Sbjct: 110 IITGLMSFMNDNQP 123
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKP--PKVAFT-TRIYHPNI-NSNGSICLDILRAQ-WSP---A 156
+ GG+F IH P ++P P+V F + ++HP I + +CL+ + W +
Sbjct: 62 FGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKELCLNRSFPEGWKKEKHS 121
Query: 157 LTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 288
L V+L D + D + PE + +YK R+K+ E+A+E
Sbjct: 122 LRRVLVVLQRSFYSYDVDTDKCINPEASVLYKEHRDKFREIAKE 165
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 41.5 bits (93), Expect = 6e-04
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL---RAQWSPALTISK 171
++GG++ I FP DYP KPP + T + N +CL I W P+ +I
Sbjct: 53 FEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSISGYHPETWLPSWSIRT 110
Query: 172 VLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 300
LL++ L P+ + + K +R++ +L+ EW K
Sbjct: 111 ALLALIGFL--PSTPGGALGSLDYPPK-ERQRLAKLSCEWKCK 150
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR---AQWSPALTISK 171
+ GG ++ + F ++P+ PP + T + +N +CL I W+P T+S
Sbjct: 63 FYGGYYWGKVIFKENFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSA 120
Query: 172 VLLSICSLLCDPNPDDPLV---PEIARIYKTDREKYNELAREW 291
+L+ + S + + +P + P+ R+Y +++N W
Sbjct: 121 ILIGLHSFMNENSPAAGSIAGTPQDQRMYAAASKEFNVKVYNW 163
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Frame = +1
Query: 1 YQGGVFFLTIHF-PTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVL 177
Y+GG FF I+ P P+V F T I+HPN+ G+ D+ QW + +
Sbjct: 76 YEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN--WDMRGIQWERRSNLEVLY 133
Query: 178 LSICSLLCDPNPD----------DPLVPEIARIYKTDREKYNELAREWTRKYA 306
I + + D D P I+R+ K D K+ ARE+ K A
Sbjct: 134 NFIVEGMRNVKYDIERRNLAQLEDMSQPNISRLAKEDWPKFERTAREFVMKMA 186
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 36.7 bits (81), Expect = 0.017
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSI---CLDILRAQWSPALTIS 168
Y+ ++ L I +YP +PP V FTT+++ +N SNG I L LR WS + I
Sbjct: 53 YESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLR-NWSNSYMIK 111
Query: 169 KVLLSI 186
VL I
Sbjct: 112 TVLEDI 117
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 16 FFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSL 195
+ +T+ P +PF PP + T + N L + QW P+ I VL+ CS+
Sbjct: 51 YIVTVAIPPKFPFSPPAITCKT-------DKNMKF-LFLEENQWKPSTGIVAVLIEACSV 102
Query: 196 LC--DPNPDDPLVPEI 237
+ D P P++P I
Sbjct: 103 ISRRDLVPRAPVLPRI 118
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 8 EEFSSLPYISLQTTLSNHQKLHSQHVFIILT*TVMVPSVLTFCVHSGHQRSPYPKCCSQS 187
EE++ + + T Q Q+V +++T ++M PS++T + G Q + P+
Sbjct: 1202 EEYTPMNFAPPPTFTYPQQMPMMQYVPVMMTSSMMTPSMMTPSMMPGQQIAMVPQQMMMQ 1261
Query: 188 AHFYAIP 208
HF +P
Sbjct: 1262 PHFSYVP 1268
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLD 129
Y+ GVF + + FP +YP P++ F T I++ + S G + ++
Sbjct: 43 YETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQVHIE 86
>AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 166 protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 19 FLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSIC 189
F I+ P P + ++ +I + +++ + D LR QW P ++ KVL+ C
Sbjct: 300 FCLINNPRSAPSRLLEIISINQILNRQFHASYKL-FDALRKQWDPTMSFQKVLVESC 355
>Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical
protein C04F12.8 protein.
Length = 272
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 AFTTRIYHPNINSNGSICLDILRAQWSP-ALTISKVLLSICSLLCDPNPDDPLVPEIARI 246
AF+ Y P+++S S+ LR +SP +L S + L+ L P P + +
Sbjct: 200 AFSASTYRPSVSSASSLATSSLRRAYSPSSLPASSLALTTSYSLFSPAPTRKPRQSLFSM 259
Query: 247 YKT 255
Y T
Sbjct: 260 YST 262
>U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane
protease (impas)family protein 3 protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -3
Query: 347 CVYVLLMSQLTHHMAYFLVHSRANSLYFSLSV 252
C++++L+ + HM+++ + + +Y SL V
Sbjct: 315 CIHIILLESFSQHMSFYFYYHEESMMYASLLV 346
>Z92829-13|CAB07344.2| 337|Caenorhabditis elegans Hypothetical
protein F10A3.6 protein.
Length = 337
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 157 LTISKVLLSICSLLCDPNP--DDPLVPEIARIYKTDREKYNELAREW 291
++IS + S+C + P+P D+ +PE + Y + E+YN L ++
Sbjct: 140 ISISFLWFSMCYFVNGPSPMKDENFLPEFQKNYCMEPEEYNYLGPQY 186
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoformb protein.
Length = 1420
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 133 LRAQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDR 261
L +WS A+ +K + S LLC D + L+ E+ +Y D+
Sbjct: 606 LEMEWSSAVQCAKSVKSALELLCTTYCDIVESLIREVVEVYADDQ 650
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoforma protein.
Length = 1418
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 133 LRAQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDR 261
L +WS A+ +K + S LLC D + L+ E+ +Y D+
Sbjct: 606 LEMEWSSAVQCAKSVKSALELLCTTYCDIVESLIREVVEVYADDQ 650
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,469,511
Number of Sequences: 27780
Number of extensions: 366944
Number of successful extensions: 1091
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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