Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k12
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              25   0.59 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   4.2  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   7.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.3  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   7.3  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           21   9.6  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 225 WHKILKVDMIYGE-KQFDEQHEVDATFLK 142
           W+ IL++ ++YGE    DE  E+ + + K
Sbjct: 13  WYLILQIALVYGEISDIDEFREMTSKYRK 41


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 394 TPLATVTPSFVIFGDPQ 344
           +P A + P  V++G+PQ
Sbjct: 98  SPSAALQPQHVVYGNPQ 114


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 143 FKNVASTSCCSSNCFS 190
           FK   + S C++NC S
Sbjct: 51  FKGQVNDSACAANCLS 66


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +1

Query: 190 SINHINFQDFMP 225
           S++H++F +F+P
Sbjct: 310 SVDHVDFDEFLP 321


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 143 FKNVASTSCCSSNCFS 190
           FK   + S C++NC S
Sbjct: 51  FKGQVNDSACAANCLS 66


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 143 FKNVASTSCCSSNCFS 190
           FK   + S C++NC S
Sbjct: 26  FKGQVNDSACAANCHS 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,346
Number of Sequences: 438
Number of extensions: 2543
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)