Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k09
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81575-2|CAB04639.1|  339|Caenorhabditis elegans Hypothetical pr...    31   0.62 
Z83109-6|CAB05522.1|  362|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p...    29   3.3  
AC006722-4|AAK68419.2|  279|Caenorhabditis elegans Hypothetical ...    29   3.3  
AC006645-9|AAF39841.2|  293|Caenorhabditis elegans Nematode asta...    29   3.3  
AL021503-7|CAI79271.1|  277|Caenorhabditis elegans Hypothetical ...    28   5.8  
AL021503-6|CAA16424.2|  459|Caenorhabditis elegans Hypothetical ...    28   5.8  

>Z81575-2|CAB04639.1|  339|Caenorhabditis elegans Hypothetical
           protein R08H2.2 protein.
          Length = 339

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 353 KRNPHFGAYPKIMLA-AVLGYVYGRLSYIS 439
           K NP FGAY ++M++ AV+  VY  LS+ S
Sbjct: 35  KANPSFGAYRRLMISYAVIEMVYSILSFTS 64


>Z83109-6|CAB05522.1|  362|Caenorhabditis elegans Hypothetical
           protein F44G3.11 protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = -1

Query: 361 ITLQTPIFDGSVC*RSEQRTERETALIEALLVTFFKGFNFVLCEFVVAQWVCD 203
           + + T ++  ++C  S Q   R  A+     + FFKG+ F+ C    A +  D
Sbjct: 102 LVIYTGLYGSTICLLSVQFVYRYWAVFSESKLKFFKGWRFIFCIMYCAAFGAD 154


>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
           protein F54E12.2 protein.
          Length = 1091

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +3

Query: 102 SGTLWLEKVKM*RRKIVIVTRSLAPATHVLPSETSHTHCATTNSHKTKLKP 254
           SG +  EK K  +     V R LA ATH +P ET  T   T    K +L P
Sbjct: 425 SGKMTDEKYKRIQLVSDRVVRQLAEATHTIPDETELTD--TPKGFKLELMP 473


>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
           protein F54E12.2 protein.
          Length = 1091

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +3

Query: 102 SGTLWLEKVKM*RRKIVIVTRSLAPATHVLPSETSHTHCATTNSHKTKLKP 254
           SG +  EK K  +     V R LA ATH +P ET  T   T    K +L P
Sbjct: 425 SGKMTDEKYKRIQLVSDRVVRQLAEATHTIPDETELTD--TPKGFKLELMP 473


>AC006722-4|AAK68419.2|  279|Caenorhabditis elegans Hypothetical
           protein Y19D10A.6 protein.
          Length = 279

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 153 IVTRSLAPATHVLPSETSHTHCATTNSHKTKL 248
           +++  LAP   + P+ TS T   TTN+  TKL
Sbjct: 248 LLSSKLAPKVPISPTSTSTTAITTTNTTTTKL 279


>AC006645-9|AAF39841.2|  293|Caenorhabditis elegans Nematode astacin
           protease protein 2 protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 153 IVTRSLAPATHVLPSETSHTHCATTNSHKTKL 248
           +++  LAP   + P+ TS T   TTN+  TKL
Sbjct: 262 LLSSKLAPKVPISPTSTSTTAITTTNTTTTKL 293


>AL021503-7|CAI79271.1|  277|Caenorhabditis elegans Hypothetical
           protein Y68A4A.10b protein.
          Length = 277

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 156 VTRSLAPATHVLPSETSHTHCATTNSHKTKLKPLKNVTRRASINAVSRSVRC 311
           V  SL PAT  + S    T C T      ++ P+K  T+  +    +  ++C
Sbjct: 27  VPGSLDPATTTIASGIQTTQCNTCTKTPQRVDPVKTTTKAPAATTKAVPLQC 78


>AL021503-6|CAA16424.2|  459|Caenorhabditis elegans Hypothetical
           protein Y68A4A.10a protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 156 VTRSLAPATHVLPSETSHTHCATTNSHKTKLKPLKNVTRRASINAVSRSVRC 311
           V  SL PAT  + S    T C T      ++ P+K  T+  +    +  ++C
Sbjct: 27  VPGSLDPATTTIASGIQTTQCNTCTKTPQRVDPVKTTTKAPAATTKAVPLQC 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,142,393
Number of Sequences: 27780
Number of extensions: 301299
Number of successful extensions: 858
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)