Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k08
         (697 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    26   0.30 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.5  

>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 618 SLPGPGSKTPAPNTYSMPPVL 680
           +L G GS TPA  T S PP L
Sbjct: 17  NLKGGGSTTPASPTLSTPPTL 37


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 621 GLHGDLLKTPERGQGPPVRPY 559
           G H +LL T   GQ   V PY
Sbjct: 77  GCHSNLLSTSPSGQNKAVAPY 97


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 621 GLHGDLLKTPERGQGPPVRPY 559
           G H +LL T   GQ   V PY
Sbjct: 77  GCHSNLLSTSPSGQNKAVAPY 97


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 624 EGLHGDLLKTPERGQGP 574
           EGL GD  K  + G GP
Sbjct: 521 EGLSGDKFKFDKNGDGP 537


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 255 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPE 350
           P + R   A E   PGP++       G P PE
Sbjct: 393 PPQIRQAFAEETLQPGPSMFLKCVASGNPTPE 424


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 618 SLPGPGSKTPAPNTYS 665
           S PG GS +P+P++ S
Sbjct: 82  SYPGGGSSSPSPSSPS 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,879
Number of Sequences: 438
Number of extensions: 5062
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)