Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k04
         (678 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c...    30   8.7  
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c...    30   8.7  
AB020660-1|BAA74876.1|  967|Homo sapiens KIAA0853 protein protein.     30   8.7  

>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
            containing 13 protein.
          Length = 1668

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 30   LIHYTITLCFGSITCHLPQYASTPSNKIDQFCVLAESCI 146
            L+  ++ L     TCH P +  T  NK+ Q  +  E C+
Sbjct: 1629 LLRLSLRLFKRKTTCHAPGHEKTEDNKLSQSSIQQELCV 1667


>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
            containing 13 protein.
          Length = 1668

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 30   LIHYTITLCFGSITCHLPQYASTPSNKIDQFCVLAESCI 146
            L+  ++ L     TCH P +  T  NK+ Q  +  E C+
Sbjct: 1629 LLRLSLRLFKRKTTCHAPGHEKTEDNKLSQSSIQQELCV 1667


>AB020660-1|BAA74876.1|  967|Homo sapiens KIAA0853 protein protein.
          Length = 967

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 30   LIHYTITLCFGSITCHLPQYASTPSNKIDQFCVLAESCI 146
            L+  ++ L     TCH P +  T  NK+ Q  +  E C+
Sbjct: 928  LLRLSLRLFKRKTTCHAPGHEKTEDNKLSQSSIQQELCV 966


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,673,328
Number of Sequences: 237096
Number of extensions: 1974817
Number of successful extensions: 10691
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10691
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)