Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k04
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        31   0.010
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.5  
DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse tr...    22   4.7  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   6.2  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   6.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   8.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   8.2  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -1

Query: 648 FRTSVKPAQDASRPRTNLLCYTYSVCFNLLPGQPSS 541
           F      A    RP  N   Y Y  C+NL P QPS+
Sbjct: 196 FMEETLKAAKRMRPAANWGYYAYPYCYNLTPNQPSA 231


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +2

Query: 212 YVGVCLRFQSNLHSHRRHAR-MSIYKKS*LKI-NNINYSTYIWSINNAVTSK 361
           Y    LR  S L     HA+   I+ K+ L   NNIN + YI+S+  AV ++
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITR 151


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +2

Query: 212 YVGVCLRFQSNLHSHRRHAR-MSIYKKS*LKI-NNINYSTYIWSINNAVTSK 361
           Y    LR  S L     HA+   I+ K+ L   NNIN + YI+S+  AV ++
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITR 151


>DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 42

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 304 KQYKL*HLYLVHKQRCNEQAIS 369
           +QY L H  L+ K +CN   +S
Sbjct: 19  QQYCLHHKILIKKNKCNAFIVS 40


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = +2

Query: 296 LKINNINYSTYIWSINNAVTSKQSLHVSQAERNSDAK 406
           +K+N+++    +  + N  T  + +H+S +E   D+K
Sbjct: 187 IKLNSLDTEQILDDMYNNNTEWEIVHMSHSESTIDSK 223


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 178 PILPQTAIVS*IQDSANTQN*SILLD 101
           P+ P TA+V+ +  +  ++N  ILL+
Sbjct: 103 PLHPHTAMVTHLPQTLTSENVEILLE 128


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 147 HDTIAVCGRMGEEKRTFLDLCDML 218
           HD + +  R GEEK   +    +L
Sbjct: 347 HDQLRLVSRFGEEKARMITTMSLL 370


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 449 YHYGNALSLTRDLEREMV 502
           Y   N +SLT DLE E+V
Sbjct: 66  YGQTNHISLTLDLEYELV 83


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 449 YHYGNALSLTRDLEREMV 502
           Y   N +SLT DLE E+V
Sbjct: 104 YGQTNHISLTLDLEYELV 121


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 147 HDTIAVCGRMGEEKRTFLDLCDML 218
           HD + +  R GEEK   +    +L
Sbjct: 347 HDQLRLVSRFGEEKARMITTMSLL 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,434
Number of Sequences: 438
Number of extensions: 3828
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)