Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1k02
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC120989-1|AAI20990.1| 424|Homo sapiens tubulin folding cofacto... 89 2e-17
BC120988-1|AAI20989.1| 424|Homo sapiens tubulin folding cofacto... 89 2e-17
AY398644-1|AAR27875.1| 424|Homo sapiens tubulin-specific chaper... 89 2e-17
U61232-1|AAB17538.1| 527|Homo sapiens cofactor E protein. 60 1e-08
BT007086-1|AAP35749.1| 527|Homo sapiens tubulin-specific chaper... 60 1e-08
BC008654-1|AAH08654.1| 527|Homo sapiens tubulin folding cofacto... 60 1e-08
AL672237-1|CAH72080.1| 527|Homo sapiens tubulin folding cofacto... 60 1e-08
AL357556-2|CAI15017.1| 527|Homo sapiens tubulin folding cofacto... 60 1e-08
BC024009-1|AAH24009.3| 725|Homo sapiens leucine rich repeat con... 40 0.012
AK058059-1|BAB71645.1| 524|Homo sapiens protein ( Homo sapiens ... 40 0.012
AK057238-1|BAB71392.1| 418|Homo sapiens protein ( Homo sapiens ... 40 0.012
Z81367-2|CAI42027.1| 409|Homo sapiens nuclear RNA export factor... 36 0.20
Z81367-1|CAI42026.1| 626|Homo sapiens nuclear RNA export factor... 36 0.20
BC131708-1|AAI31709.1| 365|Homo sapiens NXF5 protein protein. 36 0.20
BC015020-1|AAH15020.1| 626|Homo sapiens nuclear RNA export fact... 36 0.20
AL672207-5|CAI42478.1| 302|Homo sapiens nuclear RNA export fact... 36 0.20
AL672207-4|CAI42477.1| 368|Homo sapiens nuclear RNA export fact... 36 0.20
AL672207-3|CAI42476.1| 305|Homo sapiens nuclear RNA export fact... 36 0.20
AL672207-2|CAI42475.1| 397|Homo sapiens nuclear RNA export fact... 36 0.20
AL590069-2|CAD13494.1| 626|Homo sapiens nuclear RNA export fact... 36 0.20
AL590069-1|CAI40394.1| 409|Homo sapiens nuclear RNA export fact... 36 0.20
AL157436-1|CAB75659.1| 409|Homo sapiens hypothetical protein pr... 36 0.20
AK000423-1|BAA91154.1| 515|Homo sapiens protein ( Homo sapiens ... 36 0.20
AJ277659-1|CAC20433.1| 626|Homo sapiens nuclear RNA export fact... 36 0.20
AJ277658-1|CAC20432.1| 302|Homo sapiens nuclear RNA export fact... 36 0.20
AJ277657-1|CAC20431.1| 305|Homo sapiens nuclear RNA export fact... 36 0.20
AJ277655-1|CAC20429.1| 368|Homo sapiens nuclear RNA export fact... 36 0.20
AJ277654-1|CAC20428.1| 397|Homo sapiens nuclear RNA export fact... 36 0.20
AJ277526-1|CAC16588.1| 626|Homo sapiens nuclear RNA export fact... 36 0.20
AF285596-1|AAK31975.1| 560|Homo sapiens nuclear export factor 2... 36 0.20
U80073-1|AAB81111.1| 559|Homo sapiens tip associating protein p... 35 0.34
BC028041-1|AAH28041.1| 619|Homo sapiens nuclear RNA export fact... 35 0.34
BC004904-1|AAH04904.1| 619|Homo sapiens nuclear RNA export fact... 35 0.34
AJ132712-1|CAA10753.1| 619|Homo sapiens nuclear RNA export fact... 35 0.34
AF126246-1|AAD20016.1| 619|Homo sapiens tip-associated protein ... 35 0.34
AF112880-1|AAD39102.1| 619|Homo sapiens tip associating protein... 35 0.34
AB209915-1|BAD93152.1| 369|Homo sapiens nuclear RNA export fact... 35 0.34
AK124700-1|BAC85929.1| 333|Homo sapiens protein ( Homo sapiens ... 33 1.0
BC048421-1|AAH48421.1| 453|Homo sapiens LOC150356 protein protein. 32 2.4
BC036337-1|AAH36337.1| 811|Homo sapiens KIAA0644 gene product p... 31 4.2
AB014544-1|BAA31619.2| 887|Homo sapiens KIAA0644 protein protein. 31 4.2
BC098404-1|AAH98404.1| 328|Homo sapiens suppressor of defective... 31 5.6
AK024460-1|BAB15750.1| 368|Homo sapiens FLJ00052 protein protein. 31 5.6
AL035681-1|CAI22653.1| 762|Homo sapiens protein ( Human DNA seq... 30 9.7
>BC120989-1|AAI20990.1| 424|Homo sapiens tubulin folding cofactor
E-like protein.
Length = 424
Score = 88.6 bits (210), Expect = 2e-17
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +2
Query: 359 PKRSP---RLSVPTLLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILE 529
P+ SP RL++P++LVLN CA V ELDL++NKL +W EV I+
Sbjct: 38 PQGSPMKDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVS 97
Query: 530 QTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEEL 709
P++ FLNLS N L+ + ++ + LVLN++ SW +VH +L+ LP LEEL
Sbjct: 98 NVPQLEFLNLSSNPLNLSV-LERTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEEL 156
Query: 710 HLSLNE 727
L LN+
Sbjct: 157 FLCLND 162
>BC120988-1|AAI20989.1| 424|Homo sapiens tubulin folding cofactor
E-like protein.
Length = 424
Score = 88.6 bits (210), Expect = 2e-17
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +2
Query: 359 PKRSP---RLSVPTLLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILE 529
P+ SP RL++P++LVLN CA V ELDL++NKL +W EV I+
Sbjct: 38 PQGSPMKDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVS 97
Query: 530 QTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEEL 709
P++ FLNLS N L+ + ++ + LVLN++ SW +VH +L+ LP LEEL
Sbjct: 98 NVPQLEFLNLSSNPLNLSV-LERTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEEL 156
Query: 710 HLSLNE 727
L LN+
Sbjct: 157 FLCLND 162
>AY398644-1|AAR27875.1| 424|Homo sapiens tubulin-specific chaperone
cofactor E-like protein protein.
Length = 424
Score = 88.6 bits (210), Expect = 2e-17
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +2
Query: 359 PKRSP---RLSVPTLLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILE 529
P+ SP RL++P++LVLN CA V ELDL++NKL +W EV I+
Sbjct: 38 PQGSPMKDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVS 97
Query: 530 QTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEEL 709
P++ FLNLS N L+ + ++ + LVLN++ SW +VH +L+ LP LEEL
Sbjct: 98 NVPQLEFLNLSSNPLNLSV-LERTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEEL 156
Query: 710 HLSLNE 727
L LN+
Sbjct: 157 FLCLND 162
>U61232-1|AAB17538.1| 527|Homo sapiens cofactor E protein.
Length = 527
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +2
Query: 455 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYL 634
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L + + L L L L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL--KFPSGSVLTGTLSVLKVL 209
Query: 635 VLNSTYVSWPSVHSLLKALPALEELHLSLN 724
VLN T ++W V + P LEEL+L N
Sbjct: 210 VLNQTGITWAEVLRCVAGCPGLEELYLESN 239
Score = 32.7 bits (71), Expect = 1.4
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 473 LDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLS------AQIQAAQSLRPRLDSLSYL 634
LDL++N+L + +++ ++ PR+ L LS +S A I S+ P SL YL
Sbjct: 257 LDLSSNQLIDENQLY-LIAHLPRLEQLILSDTGISSLHFPDAGIGCKTSMFP---SLKYL 312
Query: 635 VLNSTYVSWPSVHSLLKALPALEEL 709
V+N +S S + L+ LP+L L
Sbjct: 313 VVNDNQISQWSFFNELEKLPSLRAL 337
>BT007086-1|AAP35749.1| 527|Homo sapiens tubulin-specific chaperone
e protein.
Length = 527
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +2
Query: 455 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYL 634
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L + + L L L L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL--KFPSGSVLTGTLSVLKVL 209
Query: 635 VLNSTYVSWPSVHSLLKALPALEELHLSLN 724
VLN T ++W V + P LEEL+L N
Sbjct: 210 VLNQTGITWAEVLRCVAGCPGLEELYLESN 239
Score = 32.7 bits (71), Expect = 1.4
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 473 LDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLS------AQIQAAQSLRPRLDSLSYL 634
LDL++N+L + +++ ++ PR+ L LS +S A I S+ P SL YL
Sbjct: 257 LDLSSNQLIDENQLY-LIAHLPRLEQLILSDTGISSLHFPDAGIGCKTSMFP---SLKYL 312
Query: 635 VLNSTYVSWPSVHSLLKALPALEEL 709
V+N +S S + L+ LP+L L
Sbjct: 313 VVNDNQISQWSFFNELEKLPSLRAL 337
>BC008654-1|AAH08654.1| 527|Homo sapiens tubulin folding cofactor E
protein.
Length = 527
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +2
Query: 455 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYL 634
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L + + L L L L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL--KFPSGSVLTGTLSVLKVL 209
Query: 635 VLNSTYVSWPSVHSLLKALPALEELHLSLN 724
VLN T ++W V + P LEEL+L N
Sbjct: 210 VLNQTGITWAEVLRCVAGCPGLEELYLESN 239
Score = 32.7 bits (71), Expect = 1.4
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 473 LDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLS------AQIQAAQSLRPRLDSLSYL 634
LDL++N+L + +++ ++ PR+ L LS +S A I S+ P SL YL
Sbjct: 257 LDLSSNQLIDENQLY-LIAHLPRLEQLILSDTGISSLHFPDAGIGCKTSMFP---SLKYL 312
Query: 635 VLNSTYVSWPSVHSLLKALPALEEL 709
V+N +S S + L+ LP+L L
Sbjct: 313 VVNDNQISQWSFFNELEKLPSLRAL 337
>AL672237-1|CAH72080.1| 527|Homo sapiens tubulin folding cofactor E
protein.
Length = 527
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +2
Query: 455 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYL 634
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L + + L L L L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL--KFPSGSVLTGTLSVLKVL 209
Query: 635 VLNSTYVSWPSVHSLLKALPALEELHLSLN 724
VLN T ++W V + P LEEL+L N
Sbjct: 210 VLNQTGITWAEVLRCVAGCPGLEELYLESN 239
Score = 32.7 bits (71), Expect = 1.4
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 473 LDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLS------AQIQAAQSLRPRLDSLSYL 634
LDL++N+L + +++ ++ PR+ L LS +S A I S+ P SL YL
Sbjct: 257 LDLSSNQLIDENQLY-LIAHLPRLEQLILSDTGISSLHFPDAGIGCKTSMFP---SLKYL 312
Query: 635 VLNSTYVSWPSVHSLLKALPALEEL 709
V+N +S S + L+ LP+L L
Sbjct: 313 VVNDNQISQWSFFNELEKLPSLRAL 337
>AL357556-2|CAI15017.1| 527|Homo sapiens tubulin folding cofactor E
protein.
Length = 527
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +2
Query: 455 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYL 634
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L + + L L L L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL--KFPSGSVLTGTLSVLKVL 209
Query: 635 VLNSTYVSWPSVHSLLKALPALEELHLSLN 724
VLN T ++W V + P LEEL+L N
Sbjct: 210 VLNQTGITWAEVLRCVAGCPGLEELYLESN 239
Score = 32.7 bits (71), Expect = 1.4
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 473 LDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLS------AQIQAAQSLRPRLDSLSYL 634
LDL++N+L + +++ ++ PR+ L LS +S A I S+ P SL YL
Sbjct: 257 LDLSSNQLIDENQLY-LIAHLPRLEQLILSDTGISSLHFPDAGIGCKTSMFP---SLKYL 312
Query: 635 VLNSTYVSWPSVHSLLKALPALEEL 709
V+N +S S + L+ LP+L L
Sbjct: 313 VVNDNQISQWSFFNELEKLPSLRAL 337
>BC024009-1|AAH24009.3| 725|Homo sapiens leucine rich repeat
containing 50 protein.
Length = 725
Score = 39.5 bits (88), Expect = 0.012
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 452 KCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI-QAAQSLRPRLDSLS 628
+C + LDL++NKL++ E+ +ILE P +R LNL N + QI +++ RL L+
Sbjct: 218 ECLRLCVLDLSHNKLSD-PEILSILESMPDLRVLNLMGNPVIRQIPNYRRTVTVRLKHLT 276
Query: 629 YL 634
YL
Sbjct: 277 YL 278
>AK058059-1|BAB71645.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ25330 fis, clone TST00576. ).
Length = 524
Score = 39.5 bits (88), Expect = 0.012
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 452 KCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI-QAAQSLRPRLDSLS 628
+C + LDL++NKL++ E+ +ILE P +R LNL N + QI +++ RL L+
Sbjct: 17 ECLRLCVLDLSHNKLSD-PEILSILESMPDLRVLNLMGNPVIRQIPNYRRTVTVRLKHLT 75
Query: 629 YL 634
YL
Sbjct: 76 YL 77
>AK057238-1|BAB71392.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ32676 fis, clone TESTI1000168, weakly similar to
PROTEIN PHOSPHATASES PP1 REGULATORY SUBUNIT SDS22. ).
Length = 418
Score = 39.5 bits (88), Expect = 0.012
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 452 KCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI-QAAQSLRPRLDSLS 628
+C + LDL++NKL++ E+ +ILE P +R LNL N + QI +++ RL L+
Sbjct: 218 ECLRLCVLDLSHNKLSD-PEILSILESMPDLRVLNLMGNPVIRQIPNYRRTVTVRLKHLT 276
Query: 629 YL 634
YL
Sbjct: 277 YL 278
>Z81367-2|CAI42027.1| 409|Homo sapiens nuclear RNA export factor 2
protein.
Length = 409
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 183 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 237
>Z81367-1|CAI42026.1| 626|Homo sapiens nuclear RNA export factor 2
protein.
Length = 626
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 325
>BC131708-1|AAI31709.1| 365|Homo sapiens NXF5 protein protein.
Length = 365
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 214
>BC015020-1|AAH15020.1| 626|Homo sapiens nuclear RNA export factor
2 protein.
Length = 626
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 325
>AL672207-5|CAI42478.1| 302|Homo sapiens nuclear RNA export factor
5 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 97 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 151
>AL672207-4|CAI42477.1| 368|Homo sapiens nuclear RNA export factor
5 protein.
Length = 368
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 214
>AL672207-3|CAI42476.1| 305|Homo sapiens nuclear RNA export factor
5 protein.
Length = 305
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 97 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 151
>AL672207-2|CAI42475.1| 397|Homo sapiens nuclear RNA export factor
5 protein.
Length = 397
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 214
>AL590069-2|CAD13494.1| 626|Homo sapiens nuclear RNA export factor
2B protein.
Length = 626
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 325
>AL590069-1|CAI40394.1| 409|Homo sapiens nuclear RNA export factor
2B protein.
Length = 409
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 183 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 237
>AL157436-1|CAB75659.1| 409|Homo sapiens hypothetical protein
protein.
Length = 409
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 183 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 237
>AK000423-1|BAA91154.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ20416 fis, clone KAT02203. ).
Length = 515
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 214
>AJ277659-1|CAC20433.1| 626|Homo sapiens nuclear RNA export factor
2 protein.
Length = 626
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 325
>AJ277658-1|CAC20432.1| 302|Homo sapiens nuclear RNA export factor
5 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 97 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 151
>AJ277657-1|CAC20431.1| 305|Homo sapiens nuclear RNA export factor
5 protein.
Length = 305
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 97 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 151
>AJ277655-1|CAC20429.1| 368|Homo sapiens nuclear RNA export factor
5 protein.
Length = 368
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 214
>AJ277654-1|CAC20428.1| 397|Homo sapiens nuclear RNA export factor
5 protein.
Length = 397
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 214
>AJ277526-1|CAC16588.1| 626|Homo sapiens nuclear RNA export factor
2 protein.
Length = 626
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 325
>AF285596-1|AAK31975.1| 560|Homo sapiens nuclear export factor 2
protein.
Length = 560
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L NNKL + + I E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 205 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEEL 259
>U80073-1|AAB81111.1| 559|Homo sapiens tip associating protein
protein.
Length = 559
Score = 34.7 bits (76), Expect = 0.34
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 583
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 206 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 246
>BC028041-1|AAH28041.1| 619|Homo sapiens nuclear RNA export factor
1 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.34
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 583
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>BC004904-1|AAH04904.1| 619|Homo sapiens nuclear RNA export factor
1 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.34
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 583
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>AJ132712-1|CAA10753.1| 619|Homo sapiens nuclear RNA export factor
1 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.34
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 583
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>AF126246-1|AAD20016.1| 619|Homo sapiens tip-associated protein TAP
protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.34
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 583
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>AF112880-1|AAD39102.1| 619|Homo sapiens tip associating protein
protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.34
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 583
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>AB209915-1|BAD93152.1| 369|Homo sapiens nuclear RNA export factor
1 variant protein.
Length = 369
Score = 34.7 bits (76), Expect = 0.34
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 583
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 279 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 319
>AK124700-1|BAC85929.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ42710 fis, clone BRAMY3007609, moderately
similar to Homo sapiens nuclear RNA export factor 2
(NXF2). ).
Length = 333
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/55 (30%), Positives = 33/55 (60%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSL 625
+++ L+L +NKL + I+E+ P+V+ LNLS N+L + + + +L+ L
Sbjct: 99 ELLSLNLCDNKLYHLDGLPDIIEKAPKVKTLNLSKNKLKSAWELGKVKGLKLEEL 153
>BC048421-1|AAH48421.1| 453|Homo sapiens LOC150356 protein protein.
Length = 453
Score = 31.9 bits (69), Expect = 2.4
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = +2
Query: 539 RVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEELHLS 718
R+ +L LS N+L+ AA PRL L YL NS ++ P + L+ALP+L LHL
Sbjct: 165 RLIYLYLSDNQLAGLSAAALEGAPRLGYL-YLERNS-FLQVPG--AALRALPSLFSLHLQ 220
Query: 719 LN 724
N
Sbjct: 221 DN 222
>BC036337-1|AAH36337.1| 811|Homo sapiens KIAA0644 gene product
protein.
Length = 811
Score = 31.1 bits (67), Expect = 4.2
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 530 QTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEEL 709
Q ++RFLNLS N L ++ A + P L SLS L+L++ + + + LP L L
Sbjct: 201 QLGKLRFLNLSANELQPSLRHAATFAP-LRSLSSLILSANSLQHLGPR-IFQHLPRLGLL 258
Query: 710 HLSLNE 727
L N+
Sbjct: 259 SLRGNQ 264
>AB014544-1|BAA31619.2| 887|Homo sapiens KIAA0644 protein protein.
Length = 887
Score = 31.1 bits (67), Expect = 4.2
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 530 QTPRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEEL 709
Q ++RFLNLS N L ++ A + P L SLS L+L++ + + + LP L L
Sbjct: 277 QLGKLRFLNLSANELQPSLRHAATFAP-LRSLSSLILSANSLQHLGPR-IFQHLPRLGLL 334
Query: 710 HLSLNE 727
L N+
Sbjct: 335 SLRGNQ 340
>BC098404-1|AAH98404.1| 328|Homo sapiens suppressor of defective
silencing 3 homolog (S. cerevisiae) protein.
Length = 328
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 125 KKSDQLFMKKNRNSENFIRLQSEQFKY*IYVQKKTLCFQ*FLIKAAVMPSLLEALERK 298
KK DQ + ++ RN+E F++L++EQ + +KK + K + +L+ LE K
Sbjct: 100 KKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEK 157
>AK024460-1|BAB15750.1| 368|Homo sapiens FLJ00052 protein protein.
Length = 368
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 125 KKSDQLFMKKNRNSENFIRLQSEQFKY*IYVQKKTLCFQ*FLIKAAVMPSLLEALERK 298
KK DQ + ++ RN+E F++L++EQ + +KK + K + +L+ LE K
Sbjct: 140 KKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEK 197
>AL035681-1|CAI22653.1| 762|Homo sapiens protein ( Human DNA
sequence from clone RP4-756G23 on chromosome
22q13.31-13.33. ).
Length = 762
Score = 29.9 bits (64), Expect = 9.7
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +2
Query: 539 RVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEELHLS 718
R+ +L LS N+L+ AA PRL L YL N ++ P + L+ALP+L LHL
Sbjct: 474 RLIYLYLSDNQLAGLSAAALEGAPRLGYL-YLERNR-FLQVPG--AALRALPSLFSLHLQ 529
Query: 719 LN 724
N
Sbjct: 530 DN 531
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,291,755
Number of Sequences: 237096
Number of extensions: 1730030
Number of successful extensions: 2417
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2404
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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