Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1k02
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64598-3|AAK39213.1| 432|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U64598-4|AAN72420.1| 418|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 36 0.022
U58755-3|AAB00693.2| 332|Caenorhabditis elegans Seven tm recept... 33 0.21
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 32 0.48
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 29 2.6
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 2.6
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 2.6
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 29 2.6
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 29 2.6
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 29 3.4
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 29 3.4
>U64598-3|AAK39213.1| 432|Caenorhabditis elegans Hypothetical
protein C52B9.3a protein.
Length = 432
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/112 (29%), Positives = 56/112 (50%)
Frame = +2
Query: 392 LLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNR 571
LLVLN + V E DL N++++W ++ IL+ P +R LN+ N
Sbjct: 48 LLVLNNMNIDTIGDSEKLATLASHVSEADLGWNQISKWSDIACILKNLPHLRVLNIGHNP 107
Query: 572 LSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEELHLSLNE 727
L+ I + +L ++LN T++ + ++ S L LP + ELH+S N+
Sbjct: 108 LNPVIDHELP----VSTLHTIILNGTHLPFKTLQSFLSVLPKVTELHMSDNQ 155
>U64598-4|AAN72420.1| 418|Caenorhabditis elegans Hypothetical
protein C52B9.3b protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 392 LLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNR 571
LLVLN + V E DL N++++W ++ IL+ P +R LN+ N
Sbjct: 48 LLVLNNMNIDTIGDSEKLATLASHVSEADLGWNQISKWSDIACILKNLPHLRVLNIGHNP 107
Query: 572 LSAQI 586
L+ I
Sbjct: 108 LNPVI 112
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 36.3 bits (80), Expect = 0.022
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 470 ELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA------QIQAAQSLRPRLDSLSY 631
EL+L N L +W+ V ILE PR++ LNL NR+ ++ DS
Sbjct: 146 ELNLYGNLLYKWKTVRQILEYFPRIQELNLRRNRMQCFNEEEDDDESEGDDHVYSDSCKK 205
Query: 632 LVLNSTYVSWPSVHSLLKALPALEEL 709
LV++ +S S+ S+L P+ ++
Sbjct: 206 LVISECNLSENSIDSILLRFPSTSDV 231
>U58755-3|AAB00693.2| 332|Caenorhabditis elegans Seven tm receptor
protein 48 protein.
Length = 332
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2
Query: 548 FLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTY 652
FLNL N + I AA SL P LDSL ++L S Y
Sbjct: 270 FLNLEMNYQTGWIYAALSLYPPLDSLVLMILVSEY 304
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 31.9 bits (69), Expect = 0.48
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 461 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRL-SAQIQAAQSLRPRLDSLSYLV 637
+++ LDL+NN + E QE I ++ +NL N++ S Q+++ + +++
Sbjct: 100 NLLRLDLSNNSIVEIQEQ-EIFPNLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLGH 158
Query: 638 LNSTYVSWPSVHSLLKALPALEELHLSLN 724
N T V PS S ++ L L+ LHL N
Sbjct: 159 NNMTAV--PS--SAIRGLKQLQSLHLHKN 183
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -2
Query: 354 NMATGMSSIDGFTSPLAPYLRSRASKSDGMTAALIKNHWKQRVF 223
+M G S DG +SP LRSR+ +D A L +NH+K+ F
Sbjct: 205 SMNNGGSGSDGKSSPDWRPLRSRSFLNDSQVAVL-QNHFKRNPF 247
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -2
Query: 354 NMATGMSSIDGFTSPLAPYLRSRASKSDGMTAALIKNHWKQRVF 223
+M G S DG +SP LRSR+ +D A L +NH+K+ F
Sbjct: 205 SMNNGGSGSDGKSSPDWRPLRSRSFLNDSQVAVL-QNHFKRNPF 247
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -2
Query: 354 NMATGMSSIDGFTSPLAPYLRSRASKSDGMTAALIKNHWKQRVF 223
+M G S DG +SP LRSR+ +D A L +NH+K+ F
Sbjct: 205 SMNNGGSGSDGKSSPDWRPLRSRSFLNDSQVAVL-QNHFKRNPF 247
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 536 PRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEELHL 715
PR L+LS NR+S SL P L+ L+L++ ++ S + LP+L L L
Sbjct: 46 PRTTVLDLSNNRISRLSADELSLYPNLEQ---LILHNNSITHLSA-DVFSTLPSLRVLDL 101
Query: 716 SLN 724
S N
Sbjct: 102 SSN 104
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 536 PRVRFLNLSFNRLSAQIQAAQSLRPRLDSLSYLVLNSTYVSWPSVHSLLKALPALEELHL 715
PR L+LS NR+S SL P L+ L+L++ ++ S + LP+L L L
Sbjct: 46 PRTTVLDLSNNRISRLSADELSLYPNLEQ---LILHNNSITHLSA-DVFSTLPSLRVLDL 101
Query: 716 SLN 724
S N
Sbjct: 102 SSN 104
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +2
Query: 470 ELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA---QIQAAQSLRPRLDS 622
+LD++ N+L++ E + P ++ LN S+NRLS +A++ RPRL++
Sbjct: 609 QLDVSKNELSQLPEYIWLC---PALKELNASYNRLSTLPMVARASRGERPRLNN 659
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +2
Query: 470 ELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA---QIQAAQSLRPRLDS 622
+LD++ N+L++ E + P ++ LN S+NRLS +A++ RPRL++
Sbjct: 607 QLDVSKNELSQLPEYIWLC---PALKELNASYNRLSTLPMVARASRGERPRLNN 657
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,798,627
Number of Sequences: 27780
Number of extensions: 277779
Number of successful extensions: 604
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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