Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k01
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   6.8  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   9.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   9.0  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +3

Query: 324 EMGCIVDAVKRPPNVCVETCVYESKDDEKTERYYTDDEDAY 446
           EM  + +  ++   +  E  +Y+ ++D + E    D+ED Y
Sbjct: 451 EMEALREGRQKKVQITFEEEIYKGEEDYEGEEDEEDEEDEY 491


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 515 KRNKPWTQSDMCELDKKPVFNVH 583
           K+ KP+++    EL+K+ +FN +
Sbjct: 272 KKRKPYSKFQTLELEKEFLFNAY 294


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 555 LTKSQSLMSTNKPNSISGRSTNYGSISAPQTRRINMS 665
           L   ++  S   P+S S   ++  S+++P +R  NMS
Sbjct: 55  LGPGRTYASALSPSSSSASPSSPSSVASPNSRASNMS 91


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 536 GSTACFAFSHSLYC 495
           G T CF + H+L C
Sbjct: 493 GCTPCFCYGHTLEC 506


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,265
Number of Sequences: 2352
Number of extensions: 10378
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)