Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1k01
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81527-16|CAB04280.1|  915|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z81527-15|CAB04279.1|  927|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z81110-8|CAB03263.1|  915|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z81110-7|CAB03262.1|  927|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U97007-6|AAB52296.3|  468|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z68119-7|CAA92193.2|  360|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z81527-16|CAB04280.1|  915|Caenorhabditis elegans Hypothetical
           protein T01D3.6b protein.
          Length = 915

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 183 TMSRRESTIEVKDYIDTKNSSGDSKAVKTKIQEENNNEIDELSKEFT 323
           T+      I+ K   D  N +G   A+K+  Q ENNN  D +  E T
Sbjct: 330 TLCGLAGNIDGKKLDDVVNKNGSVLAIKSSRQPENNNHADFMKTEDT 376


>Z81527-15|CAB04279.1|  927|Caenorhabditis elegans Hypothetical
           protein T01D3.6a protein.
          Length = 927

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 183 TMSRRESTIEVKDYIDTKNSSGDSKAVKTKIQEENNNEIDELSKEFT 323
           T+      I+ K   D  N +G   A+K+  Q ENNN  D +  E T
Sbjct: 330 TLCGLAGNIDGKKLDDVVNKNGSVLAIKSSRQPENNNHADFMKTEDT 376


>Z81110-8|CAB03263.1|  915|Caenorhabditis elegans Hypothetical
           protein T01D3.6b protein.
          Length = 915

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 183 TMSRRESTIEVKDYIDTKNSSGDSKAVKTKIQEENNNEIDELSKEFT 323
           T+      I+ K   D  N +G   A+K+  Q ENNN  D +  E T
Sbjct: 330 TLCGLAGNIDGKKLDDVVNKNGSVLAIKSSRQPENNNHADFMKTEDT 376


>Z81110-7|CAB03262.1|  927|Caenorhabditis elegans Hypothetical
           protein T01D3.6a protein.
          Length = 927

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 183 TMSRRESTIEVKDYIDTKNSSGDSKAVKTKIQEENNNEIDELSKEFT 323
           T+      I+ K   D  N +G   A+K+  Q ENNN  D +  E T
Sbjct: 330 TLCGLAGNIDGKKLDDVVNKNGSVLAIKSSRQPENNNHADFMKTEDT 376


>U97007-6|AAB52296.3|  468|Caenorhabditis elegans Hypothetical
           protein ZC196.4 protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +3

Query: 207 IEVKDYIDTKNSSGDSKAVKTK---IQEENNNEIDELSKEFTEMGCIVDAVKRPPNVCVE 377
           IE+   +  K        VKT+   + E+ N      +K  TEM   +D      N+ VE
Sbjct: 48  IEISIKVPQKEKCAVGNPVKTEEVPLDEQINISFVNCTKS-TEMQISLDLQDESKNISVE 106

Query: 378 TCVYESKDDEKTE 416
           T + +S  +EKTE
Sbjct: 107 TELQDSSSNEKTE 119


>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
            F54D1.6 protein.
          Length = 1423

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 28/119 (23%), Positives = 46/119 (38%)
 Frame = +3

Query: 270  KIQEENNNEIDELSKEFTEMGCIVDAVKRPPNVCVETCVYESKDDEKTERYYTDDEDAYX 449
            +++E    +ID LS+    MG +  AV  PP   V     ++++ E  +RY         
Sbjct: 983  RVRESYAIDIDRLSEYQESMGILNIAVSVPPQYGVRPDGDKTREQEIRQRYNLPRVSGVF 1042

Query: 450  XXXXXXXXXXXXXIETVERVTKSETSRGPSQICVNLTKSQSLMSTNKPNSISGRSTNYG 626
                           T+  V  SET R   Q  +N+ + Q         +I+ +  NYG
Sbjct: 1043 RPFPDQSSGSYLNTLTLNDV-NSETYR---QQIINMYRVQGSGEPGSDQNINNQGNNYG 1097


>Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical
           protein D2005.4 protein.
          Length = 1188

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = +3

Query: 225 IDTKNSSGDSKAVKTKIQEENNNEIDELSKEFTEMGCIVDAVKRPPNVCVETCVYESKDD 404
           +D +N       ++ K++E  +  +DE+     ++   +    R  N  VE  V+ES+D+
Sbjct: 34  VDQENVKNTLHVIENKVEEPESAVVDEVEVPIEKIIDCLGVEAREDNGKVEDNVFESQDE 93


>Z68119-7|CAA92193.2|  360|Caenorhabditis elegans Hypothetical
           protein T18D3.3 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 119 IHLNICSN*ASSSLIYSLRKKSHKIYNL-QILIKIELF 9
           +HL I +N  S S++   RK   + YN+ +I I+IE F
Sbjct: 308 VHLEIDANSQSQSILRETRKMLKQTYNVHEITIQIEEF 345


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,252,035
Number of Sequences: 27780
Number of extensions: 247859
Number of successful extensions: 886
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)