Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1j23
         (786 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036819-1|AAH36819.1|  377|Homo sapiens tubulin tyrosine ligase...    32   2.0  
AC012442-1|AAX81998.1|  377|Homo sapiens unknown protein.              32   2.0  
AB071393-1|BAC06832.2|  377|Homo sapiens tubulin tyrosine ligase...    32   2.0  

>BC036819-1|AAH36819.1|  377|Homo sapiens tubulin tyrosine ligase
           protein.
          Length = 377

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
 Frame = -1

Query: 240 KVYRKKTLQSNQVGRQSPETLPACRWLPNSFVHNPR--------SQINVEPPLTNKRT 91
           K+ RK +L   ++ + SPE   +C W P S+V  P         +Q  ++PP++N RT
Sbjct: 70  KLCRKASLV--KLIKTSPELAESCTWFPESYVIYPTNLKTPVAPAQNGIQPPISNSRT 125


>AC012442-1|AAX81998.1|  377|Homo sapiens unknown protein.
          Length = 377

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
 Frame = -1

Query: 240 KVYRKKTLQSNQVGRQSPETLPACRWLPNSFVHNPR--------SQINVEPPLTNKRT 91
           K+ RK +L   ++ + SPE   +C W P S+V  P         +Q  ++PP++N RT
Sbjct: 70  KLCRKASLV--KLIKTSPELAESCTWFPESYVIYPTNLKTPVAPAQNGIQPPISNSRT 125


>AB071393-1|BAC06832.2|  377|Homo sapiens tubulin tyrosine ligase
           protein.
          Length = 377

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
 Frame = -1

Query: 240 KVYRKKTLQSNQVGRQSPETLPACRWLPNSFVHNPR--------SQINVEPPLTNKRT 91
           K+ RK +L   ++ + SPE   +C W P S+V  P         +Q  ++PP++N RT
Sbjct: 70  KLCRKASLV--KLIKTSPELAESCTWFPESYVIYPTNLKTPVAPAQNGIQPPISNSRT 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,639,802
Number of Sequences: 237096
Number of extensions: 2081083
Number of successful extensions: 4066
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4066
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)