Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1j18
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.            31   3.2  
AY640564-1|AAT65164.1|  118|Homo sapiens immunoglobulin E variab...    31   4.3  
AY640509-1|AAT65113.1|  118|Homo sapiens immunoglobulin E variab...    31   4.3  
DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.          30   7.4  
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.         30   7.4  
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.          30   7.4  
M60502-1|AAA63248.1|  797|Homo sapiens profilaggrin protein.           30   9.8  

>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
          Length = 4061

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 95   HSLQHHMYVSRKSRSNSSPVQSGYMYSQVDNYPGTLSSFGIGYGGATHNE 244
            HS  HH + + + RS++S  QSG   +    Y    S  G  + G+ H+E
Sbjct: 2163 HSGSHHSHTTSQGRSDASRGQSGSRSASRKTYDKEQSGDGSRHSGSHHHE 2212



 Score = 30.3 bits (65), Expect = 7.4
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 95   HSLQHHMYVSRKSRSNSSPVQSGYMYSQVDNYPGTLSSFGIGYGGATHNEPA 250
            HS  HH + + + RS++S  QSG   +         S  G  + G+ H+E A
Sbjct: 1190 HSGSHHSHTTSQGRSDASHGQSGSRSASRQTRKDKQSGDGSRHSGSRHHEAA 1241



 Score = 30.3 bits (65), Expect = 7.4
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 95   HSLQHHMYVSRKSRSNSSPVQSGYMYSQVDNYPGTLSSFGIGYGGATHNEPA 250
            HS  HH + + + RS++S  QSG   +         S  G  + G+ H+EP+
Sbjct: 1514 HSGYHHSHTTPQGRSDASHGQSGPRSASRQTRNEEQSGDGSRHSGSRHHEPS 1565


>AY640564-1|AAT65164.1|  118|Homo sapiens immunoglobulin E variable
           region protein.
          Length = 118

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 137 SNSSPVQSGYMYSQVDNYPGT-LSSFG-IGYGGATHNEPAVNDRKT 268
           S  S    GY +S +  YPG  L   G I Y G+TH  P++  R T
Sbjct: 25  SGGSISSGGYYWSWIRQYPGKGLEWIGDIYYSGSTHYNPSLKSRVT 70


>AY640509-1|AAT65113.1|  118|Homo sapiens immunoglobulin E variable
           region protein.
          Length = 118

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 137 SNSSPVQSGYMYSQVDNYPGT-LSSFG-IGYGGATHNEPAVNDRKT 268
           S  S    GY +S +  YPG  L   G I Y G+TH  P++  R T
Sbjct: 25  SGGSISSGGYYWSWIRQYPGKGLEWIGDIYYSGSTHYNPSLKSRVT 70


>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 137  SNSSPVQSGYMYSQVDNYPGTLSSFGIGYGGATHNE 244
            S +SP  SG+ +SQ  +  G   S G G  G TH +
Sbjct: 2190 SEASPTHSGHTHSQAGSRHGQSGSSGHGRQGTTHGQ 2225


>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 137  SNSSPVQSGYMYSQVDNYPGTLSSFGIGYGGATHNE 244
            S +SP  SG+ +SQ  +  G   S G G  G TH +
Sbjct: 2190 SEASPTHSGHTHSQAGSRHGQSGSSGHGRQGTTHGQ 2225


>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 137  SNSSPVQSGYMYSQVDNYPGTLSSFGIGYGGATHNE 244
            S +SP  SG+ +SQ  +  G   S G G  G TH +
Sbjct: 2190 SEASPTHSGHTHSQAGSRHGQSGSSGHGRQGTTHGQ 2225


>M60502-1|AAA63248.1|  797|Homo sapiens profilaggrin protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 95  HSLQHHMYVSRKSRSNSSPVQSGYMYSQVDNYPGTLSSFGIGYGGATHNE 244
           HS  HH + + + RS++S  QSG   +    +    S  G  + G+ H E
Sbjct: 195 HSGSHHSHTTSQGRSDASRGQSGSRSASRQTHDQEQSGDGSRHSGSRHQE 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,178,912
Number of Sequences: 237096
Number of extensions: 2280995
Number of successful extensions: 4655
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4655
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)