Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1j09
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069250-1|AAL39395.1|  420|Drosophila melanogaster GM02445p pro...    98   1e-20
AE014298-2202|AAF48500.1|  420|Drosophila melanogaster CG11679-P...    98   1e-20
BT004897-1|AAO47875.1|  856|Drosophila melanogaster LD13416p pro...    29   9.3  
AF323978-1|AAL55993.1|  973|Drosophila melanogaster split centra...    29   9.3  
AE014296-93|AAN11442.1|  952|Drosophila melanogaster CG1228-PD, ...    29   9.3  
AE014296-92|AAN11441.1|  952|Drosophila melanogaster CG1228-PC, ...    29   9.3  
AE014296-91|AAF47380.2|  952|Drosophila melanogaster CG1228-PA, ...    29   9.3  
AE014296-85|AAN11443.2|  856|Drosophila melanogaster CG1228-PB, ...    29   9.3  

>AY069250-1|AAL39395.1|  420|Drosophila melanogaster GM02445p
           protein.
          Length = 420

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
 Frame = +2

Query: 368 LENASIPLKKKIVHKKSIAENLSQKEGHFLTLAYATANSYDLKALKEALVEQKLYEPGNL 547
           LE+   P++ +I+ KK +A +     G   T  Y TA  Y+L+ L+ AL EQ LYE    
Sbjct: 71  LESILSPIRTRIIRKKRLAIDELSALGFLNTRGYTTAEEYNLEDLQIALREQNLYETKRF 130

Query: 548 KTVEI----GNVVVANAVYNIGSEQREIFFFKEGAVVFWNCSELEASNVLEFVKPYELES 715
            + +      NV+   A Y  G + REIFFF+EG+VVFWNCS++E +NVL F++ +E ES
Sbjct: 131 FSTDNLDVEQNVLFVAAKYPTGQQPREIFFFREGSVVFWNCSDIETNNVLSFLRAFERES 190

Query: 716 Y 718
           Y
Sbjct: 191 Y 191


>AE014298-2202|AAF48500.1|  420|Drosophila melanogaster CG11679-PA
           protein.
          Length = 420

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
 Frame = +2

Query: 368 LENASIPLKKKIVHKKSIAENLSQKEGHFLTLAYATANSYDLKALKEALVEQKLYEPGNL 547
           LE+   P++ +I+ KK +A +     G   T  Y TA  Y+L+ L+ AL EQ LYE    
Sbjct: 71  LESILSPIRTRIIRKKRLAIDELSALGFLNTRGYTTAEEYNLEDLQIALREQNLYETKRF 130

Query: 548 KTVEI----GNVVVANAVYNIGSEQREIFFFKEGAVVFWNCSELEASNVLEFVKPYELES 715
            + +      NV+   A Y  G + REIFFF+EG+VVFWNCS++E +NVL F++ +E ES
Sbjct: 131 FSTDNLDVEQNVLFVAAKYPTGQQPREIFFFREGSVVFWNCSDIETNNVLSFLRAFERES 190

Query: 716 Y 718
           Y
Sbjct: 191 Y 191


>BT004897-1|AAO47875.1|  856|Drosophila melanogaster LD13416p
           protein.
          Length = 856

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 275 AVWE---KSHR*AKHKRPYRVSQFLTFSIGIRTFCSVPNVFQNVEMS 144
           A+W+   + H   + KRP+R+S+FL  S+G + + S     Q V+ S
Sbjct: 188 ALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGRTELQAVQES 234


>AF323978-1|AAL55993.1|  973|Drosophila melanogaster split central
           complex protein.
          Length = 973

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 275 AVWE---KSHR*AKHKRPYRVSQFLTFSIGIRTFCSVPNVFQNVEMS 144
           A+W+   + H   + KRP+R+S+FL  S+G + + S     Q V+ S
Sbjct: 306 ALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGRTELQAVQES 352


>AE014296-93|AAN11442.1|  952|Drosophila melanogaster CG1228-PD,
           isoform D protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 275 AVWE---KSHR*AKHKRPYRVSQFLTFSIGIRTFCSVPNVFQNVEMS 144
           A+W+   + H   + KRP+R+S+FL  S+G + + S     Q V+ S
Sbjct: 284 ALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGRTELQAVQES 330


>AE014296-92|AAN11441.1|  952|Drosophila melanogaster CG1228-PC,
           isoform C protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 275 AVWE---KSHR*AKHKRPYRVSQFLTFSIGIRTFCSVPNVFQNVEMS 144
           A+W+   + H   + KRP+R+S+FL  S+G + + S     Q V+ S
Sbjct: 284 ALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGRTELQAVQES 330


>AE014296-91|AAF47380.2|  952|Drosophila melanogaster CG1228-PA,
           isoform A protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 275 AVWE---KSHR*AKHKRPYRVSQFLTFSIGIRTFCSVPNVFQNVEMS 144
           A+W+   + H   + KRP+R+S+FL  S+G + + S     Q V+ S
Sbjct: 284 ALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGRTELQAVQES 330


>AE014296-85|AAN11443.2|  856|Drosophila melanogaster CG1228-PB,
           isoform B protein.
          Length = 856

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 275 AVWE---KSHR*AKHKRPYRVSQFLTFSIGIRTFCSVPNVFQNVEMS 144
           A+W+   + H   + KRP+R+S+FL  S+G + + S     Q V+ S
Sbjct: 188 ALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGRTELQAVQES 234


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,880,903
Number of Sequences: 53049
Number of extensions: 591552
Number of successful extensions: 1263
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)