Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1j09
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    24   1.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   7.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.5  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.5  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.5  

>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -1

Query: 240 QATLPRIAVFNILDRYTDILF 178
           + ++P+I   NI+D+Y+ I+F
Sbjct: 452 RVSMPKIKDVNIIDKYSRIIF 472


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -1

Query: 531 YSFCSTNASFRALRS*ELAVAYARVKKCPSF*LKFSAIDF 412
           Y  C+ N     LR       Y R+KKC +  +   A+ F
Sbjct: 101 YRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRF 140


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 644 VFWNCSELEASNVLEFVKPYELESYPR 724
           + W+    E     + V+ YE+  YPR
Sbjct: 437 ISWDAPITEIGGDSDLVERYEVRCYPR 463


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 238 LCFAYRCDFSQTAI 279
           LCF Y  DF++T +
Sbjct: 130 LCFVYPLDFARTRL 143


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 238 LCFAYRCDFSQTAI 279
           LCF Y  DF++T +
Sbjct: 130 LCFVYPLDFARTRL 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,333
Number of Sequences: 438
Number of extensions: 4234
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)