Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1j08
         (737 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0379 + 43177978-43178572,43178643-43178674                       33   0.31 
07_01_1096 - 10063016-10063117,10063530-10063580,10063924-100640...    30   1.7  
07_01_1089 + 10004773-10004831,10004924-10005033,10005631-100057...    30   1.7  
08_02_0038 + 11497286-11497876                                         28   6.7  
06_02_0060 - 11026885-11026929,11027732-11027756,11027886-110279...    28   8.9  
03_02_0762 - 10968888-10969466,10972522-10974175,10974277-109743...    28   8.9  
02_03_0058 + 14536336-14536593,14536715-14536984                       28   8.9  

>01_07_0379 + 43177978-43178572,43178643-43178674
          Length = 208

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 448 YRCTCIVFFSRKDLCNEKNIFTRYGHWLFRFYHIYRIVVIFYGGGV 585
           Y C C  F +     + K IF  +  W +R+Y +Y       GGG+
Sbjct: 159 YSCACCAFRNTATATSSKTIFHLHPRWEYRWYLLYLCARESQGGGM 204


>07_01_1096 -
           10063016-10063117,10063530-10063580,10063924-10064033,
           10064367-10064454,10064543-10064603,10065198-10065295,
           10065394-10065512,10066593-10066702,10066801-10066859
          Length = 265

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 226 VWHCSRANHCSF 261
           +WHC R NHCSF
Sbjct: 6   IWHCIRHNHCSF 17


>07_01_1089 +
           10004773-10004831,10004924-10005033,10005631-10005749,
           10005833-10005930,10006834-10006921,10006993-10007127,
           10007211-10007313,10007506-10007618,10007821-10007868
          Length = 290

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 226 VWHCSRANHCSF 261
           +WHC R NHCSF
Sbjct: 6   IWHCIRHNHCSF 17


>08_02_0038 + 11497286-11497876
          Length = 196

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 215 QPGQSLQLQDRAKISKDTHISEGTYRNNDLLRA 117
           QPG +L   + A++ K T + EGT + + L+ A
Sbjct: 161 QPGDALHRGEPARMEKQTSVGEGTTQRHALVMA 193


>06_02_0060 -
           11026885-11026929,11027732-11027756,11027886-11027992,
           11028023-11028103,11028301-11028405,11031495-11031762,
           11031854-11032056
          Length = 277

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
 Frame = +2

Query: 335 LFIGNGLLFLGVTFSSKSCVKYFVYVTFAMCLIMIMGCIGAPVSCF-----FLAKTCVMK 499
           LF+  G+ F+ + F+    V   +   FA+C  +  G I A +          A    M+
Sbjct: 98  LFLATGIFFVFIAFALFLPVMVIMPQKFAICFTLGCGLIIASIFALKGPASQFAHMTSME 157

Query: 500 KISSPAMVIGYLGFTIFIELWL--YFMVV 580
           ++     +IG +  TI++ ++L  YF+ V
Sbjct: 158 RLPFTGALIGCMVGTIYVSMFLHSYFLSV 186


>03_02_0762 -
           10968888-10969466,10972522-10974175,10974277-10974359,
           10974435-10974533,10974620-10974706,10974782-10974838,
           10974939-10975065,10975344-10975465,10975685-10975732,
           10975867-10976268
          Length = 1085

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = -2

Query: 532 ITNDHSG*RYFFHYT-----SLCEKKTRYRCTDTTHDHYKAHGKSHVYKIFDAGLRRKRY 368
           I +D +G   FFHYT      + + + R RC   + +    H +   + +FD      + 
Sbjct: 650 IRHDRNGDDEFFHYTDYRFGKVLDPEDRRRCRSQSAESCDEHFRRSEHLVFDHFTHPDQL 709

Query: 367 S*KQQTISNEQHQRSE 320
               Q  +N+ H++SE
Sbjct: 710 MLSHQ--ANDNHRKSE 723


>02_03_0058 + 14536336-14536593,14536715-14536984
          Length = 175

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 350 GLLFLGVTFSSKSCVKYFVYVTFAMCLIMIMGCIGAPVSCFFLAKTCVMKKI 505
           G+ F+G    S++C    V V +    +  M C  A V    L KTC   +I
Sbjct: 42  GIDFMGPFLKSRNCEYILVAVDYVSKWVEAMPCSAADVHKNHLPKTCGQAEI 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,191,670
Number of Sequences: 37544
Number of extensions: 402324
Number of successful extensions: 1080
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)