Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1j08
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY226553-1|AAO47379.1|  606|Drosophila melanogaster pickpocket 2...    30   3.8  
AY226552-1|AAO47378.1|  632|Drosophila melanogaster pickpocket 2...    30   3.8  
AY071260-1|AAL48882.1|  236|Drosophila melanogaster RE29825p pro...    30   3.8  
AE014298-2487|AAF48671.3|  606|Drosophila melanogaster CG4805-PA...    30   3.8  
AE014298-2486|AAX52502.1|  632|Drosophila melanogaster CG4805-PB...    30   3.8  
AE014296-2985|AAF49286.1|  236|Drosophila melanogaster CG5492-PB...    30   3.8  
AE014296-2984|AAN11686.1|  236|Drosophila melanogaster CG5492-PA...    30   3.8  

>AY226553-1|AAO47379.1|  606|Drosophila melanogaster pickpocket 28
           short form protein.
          Length = 606

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +2

Query: 227 YGIVQEQIIAHFMNTTKVDEGSKKMALMSIGFTSLMLFIGNGLLFLGVTFSSKSCVKYFV 406
           Y    E  I HF   T +   + K  +   GFT  +   G GLL L + FS  S ++ F 
Sbjct: 452 YSNASEISILHFYYMTNIFRSTTKSEMF--GFTEFLSNTG-GLLGLFMGFSIFSVIEIFF 508

Query: 407 YVT 415
           Y+T
Sbjct: 509 YIT 511


>AY226552-1|AAO47378.1|  632|Drosophila melanogaster pickpocket 28
           long form protein.
          Length = 632

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +2

Query: 227 YGIVQEQIIAHFMNTTKVDEGSKKMALMSIGFTSLMLFIGNGLLFLGVTFSSKSCVKYFV 406
           Y    E  I HF   T +   + K  +   GFT  +   G GLL L + FS  S ++ F 
Sbjct: 478 YSNASEISILHFYYMTNIFRSTTKSEMF--GFTEFLSNTG-GLLGLFMGFSIFSVIEIFF 534

Query: 407 YVT 415
           Y+T
Sbjct: 535 YIT 537


>AY071260-1|AAL48882.1|  236|Drosophila melanogaster RE29825p
           protein.
          Length = 236

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 398 YFVYVT-FAMCLIMIMGCIGA--PVSCFFLAKTCVMKKISSPAMVIGYLGF 541
           Y + VT   +CL+  +GC+GA   V C  L    ++  +    ++ G LG+
Sbjct: 60  YVLLVTSIIICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGY 110


>AE014298-2487|AAF48671.3|  606|Drosophila melanogaster CG4805-PA,
           isoform A protein.
          Length = 606

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +2

Query: 227 YGIVQEQIIAHFMNTTKVDEGSKKMALMSIGFTSLMLFIGNGLLFLGVTFSSKSCVKYFV 406
           Y    E  I HF   T +   + K  +   GFT  +   G GLL L + FS  S ++ F 
Sbjct: 452 YSNASEISILHFYYMTNIFRSTTKSEMF--GFTEFLSNTG-GLLGLFMGFSIFSVIEIFF 508

Query: 407 YVT 415
           Y+T
Sbjct: 509 YIT 511


>AE014298-2486|AAX52502.1|  632|Drosophila melanogaster CG4805-PB,
           isoform B protein.
          Length = 632

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +2

Query: 227 YGIVQEQIIAHFMNTTKVDEGSKKMALMSIGFTSLMLFIGNGLLFLGVTFSSKSCVKYFV 406
           Y    E  I HF   T +   + K  +   GFT  +   G GLL L + FS  S ++ F 
Sbjct: 478 YSNASEISILHFYYMTNIFRSTTKSEMF--GFTEFLSNTG-GLLGLFMGFSIFSVIEIFF 534

Query: 407 YVT 415
           Y+T
Sbjct: 535 YIT 537


>AE014296-2985|AAF49286.1|  236|Drosophila melanogaster CG5492-PB,
           isoform B protein.
          Length = 236

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 398 YFVYVT-FAMCLIMIMGCIGA--PVSCFFLAKTCVMKKISSPAMVIGYLGF 541
           Y + VT   +CL+  +GC+GA   V C  L    ++  +    ++ G LG+
Sbjct: 60  YVLLVTSIIICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGY 110


>AE014296-2984|AAN11686.1|  236|Drosophila melanogaster CG5492-PA,
           isoform A protein.
          Length = 236

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 398 YFVYVT-FAMCLIMIMGCIGA--PVSCFFLAKTCVMKKISSPAMVIGYLGF 541
           Y + VT   +CL+  +GC+GA   V C  L    ++  +    ++ G LG+
Sbjct: 60  YVLLVTSIIICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGY 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,346,677
Number of Sequences: 53049
Number of extensions: 728880
Number of successful extensions: 2132
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2132
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)