Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1j08
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70271-7|CAJ80829.1| 559|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z70271-6|CAA94232.1| 562|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81533-1|CAB04334.1| 329|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81484-1|CAB03967.1| 314|Caenorhabditis elegans Hypothetical pr... 29 4.5
U80837-4|AAB37905.1| 504|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z70271-7|CAJ80829.1| 559|Caenorhabditis elegans Hypothetical
protein W08D2.3b protein.
Length = 559
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 338 FIGNGLLFLGVTFSSKSCVKYFVYVTFAMCLIMIMGC-IGAPVSCFFLAKTCVM 496
F NG +FLG F S + + + CLI+I C + P + + C++
Sbjct: 73 FAFNGSIFLGAVFHSNLSRRLSLKYVYITCLILISACFLALPHAAHIILLLCIV 126
>Z70271-6|CAA94232.1| 562|Caenorhabditis elegans Hypothetical
protein W08D2.3a protein.
Length = 562
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 338 FIGNGLLFLGVTFSSKSCVKYFVYVTFAMCLIMIMGC-IGAPVSCFFLAKTCVM 496
F NG +FLG F S + + + CLI+I C + P + + C++
Sbjct: 76 FAFNGSIFLGAVFHSNLSRRLSLKYVYITCLILISACFLALPHAAHIILLLCIV 129
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +2
Query: 320 FTSLMLFIGNGLLFLGVTFSSKSCVKYFVYVTFAMCLIMIMG 445
FT + +FI + +LGV++S+KS + + Y+ F + LI++ G
Sbjct: 54 FTGVTIFIIVAVGYLGVSWSNKSLL--YSYIGFVILLILVHG 93
>Z81533-1|CAB04334.1| 329|Caenorhabditis elegans Hypothetical
protein F36G9.2 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +1
Query: 349 WFAVFRSNVFV*VLRQIFCIRDF-CHVPYN--DHGLYRCTCIVFFSRKDLCNEKNIFTRY 519
W +SN+ ++Q+ CI F PY + CT +V F D+C E F Y
Sbjct: 157 WDPSDQSNILKKTMKQVPCIPGFIAEYPYFILSLNIIYCTTVVGFFVSDICFEILFFFFY 216
Query: 520 GHW 528
+W
Sbjct: 217 IYW 219
>Z81484-1|CAB03967.1| 314|Caenorhabditis elegans Hypothetical
protein C47A10.2 protein.
Length = 314
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 305 LMSIGFTSLMLFIGNGLLFLGVTFSSKSCVKYFVYVT--FAMCLIMIMGCIGAP---VSC 469
L +I +L + + G L T ++ VK+ ++ ++MCL +++ G P
Sbjct: 16 LFTITAFTLPIHLFGGYCILFKTPNAMKSVKWTLFNLQFWSMCLDLLISFFGQPFLYTPG 75
Query: 470 FFLAKTCVMKKISSPAMVIGYLGFTIFI 553
+ V+ KI P + YLG T+F+
Sbjct: 76 YAGVSLGVLDKIGVPTWITIYLGMTLFV 103
>U80837-4|AAB37905.1| 504|Caenorhabditis elegans Hypothetical
protein F07E5.6 protein.
Length = 504
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +1
Query: 307 NVNWIH--FSDVVHWKWFAVFRS 369
N+NWI FS+ V WK+F +F S
Sbjct: 78 NINWIGTTFSEFVVWKFFEIFPS 100
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = -2
Query: 580 HHHKI*PQFYKYGKT*ITNDHSG*RYFFHYT----SLCEKKTRYRCTDTTHDHYKAHGKS 413
HHHK+ Q + + H H S+ + ++ T HDH+ H +S
Sbjct: 313 HHHKLEEQVPQVVHEHVIEQHYEPYQIVHENHNVLSVDFGEDQHSITHHDHDHHHHHHES 372
Query: 412 HVYKIFDAGLRRKR 371
HV F + +++ R
Sbjct: 373 HVTHTFTSNVKQSR 386
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = -2
Query: 580 HHHKI*PQFYKYGKT*ITNDHSG*RYFFHYT----SLCEKKTRYRCTDTTHDHYKAHGKS 413
HHHK+ Q + + H H S+ + ++ T HDH+ H +S
Sbjct: 313 HHHKLEEQVPQVVHEHVIEQHYEPYQIVHENHNVLSVDFGEDQHSITHHDHDHHHHHHES 372
Query: 412 HVYKIFDAGLRRKR 371
HV F + +++ R
Sbjct: 373 HVTHTFTSNVKQSR 386
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = -2
Query: 580 HHHKI*PQFYKYGKT*ITNDHSG*RYFFHYT----SLCEKKTRYRCTDTTHDHYKAHGKS 413
HHHK+ Q + + H H S+ + ++ T HDH+ H +S
Sbjct: 313 HHHKLEEQVPQVVHEHVIEQHYEPYQIVHENHNVLSVDFGEDQHSITHHDHDHHHHHHES 372
Query: 412 HVYKIFDAGLRRKR 371
HV F + +++ R
Sbjct: 373 HVTHTFTSNVKQSR 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,644,037
Number of Sequences: 27780
Number of extensions: 399604
Number of successful extensions: 1154
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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