Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1j08
(737 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 25 0.74
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 25 0.74
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 25 0.74
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 3.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 3.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.2
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.2
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.9
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 6.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.1
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 25.0 bits (52), Expect = 0.74
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 302 ALMSIGFTSLMLFIGNGLLFLGV-TFSSKSCVKYFVYVTFAM 424
A +++GF L +GN L+ L V T+ V+ F V+ A+
Sbjct: 39 ASLTLGFLVLATVLGNALVILSVFTYRPLRIVQNFFIVSLAV 80
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 25.0 bits (52), Expect = 0.74
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 302 ALMSIGFTSLMLFIGNGLLFLGV-TFSSKSCVKYFVYVTFAM 424
A +++GF L +GN L+ L V T+ V+ F V+ A+
Sbjct: 39 ASLTLGFLVLATVLGNALVILSVFTYRPLRIVQNFFIVSLAV 80
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 25.0 bits (52), Expect = 0.74
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 302 ALMSIGFTSLMLFIGNGLLFLGV-TFSSKSCVKYFVYVTFAM 424
A +++GF L +GN L+ L V T+ V+ F V+ A+
Sbjct: 39 ASLTLGFLVLATVLGNALVILSVFTYRPLRIVQNFFIVSLAV 80
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 3.0
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -3
Query: 660 LKQATSSFAQNLSDRNLNYNDSLKLYPTTIKYNHNSINMVKPK*PMTI 517
+ ++++ N+S+ N N N + KLY YN N I + P+ I
Sbjct: 82 ISSLSNNYISNISNYNNNNNYNKKLY-----YNINYIEQIPVPVPVPI 124
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 3.0
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -3
Query: 660 LKQATSSFAQNLSDRNLNYNDSLKLYPTTIKYNHNSINMVKPK*PMTI 517
+ ++++ N+S+ N N N + KLY YN N I + P+ I
Sbjct: 320 ISSLSNNYISNISNYNNNNNYNKKLY-----YNINYIEQIPVPVPVPI 362
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 630 NLSDRNLNYNDSLKLYPTTIKYN 562
++SD N++ +D +++ T KYN
Sbjct: 6 DMSDGNIHMSDVIEVIETDTKYN 28
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 630 NLSDRNLNYNDSLKLYPTTIKYN 562
++SD N++ +D +++ T KYN
Sbjct: 6 DMSDGNIHMSDVIEVIETDTKYN 28
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 5.2
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 678 NNYETGLKQATSSFAQNLSDRNLNYNDSLKLYPTTIKYNHNSINMVKPK*PMTI 517
NNY+ ++ N ++ N NYN++ K + YN N I + P+ I
Sbjct: 320 NNYKYSNYNNYNNNYNNYNNYNNNYNNNYK----KLYYNINYIEQIPVPVPVPI 369
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 136 FRYVPSEIWVSFDILA 183
F + ++WVSFD+L+
Sbjct: 109 FGTIMCDLWVSFDVLS 124
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 292 EENGSNVNWIHFSDVVHWK 348
EE+ N NW H + W+
Sbjct: 182 EESNENYNWEHKETHIDWQ 200
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 32 INEIYIQIFVNKQKTFIQI**VVFLKMEMPEVNHCFGMFPPKYGCLLISW 181
+ E + + K F ++ VVF + E +H F P +++SW
Sbjct: 171 VAEETVDYMLEKSGNFSRL--VVFFRFERQIGHHLIQTFAPSTLVVMLSW 218
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 148 EHTETMIYFGHLHFQKNYLLYLYKCFL 68
EH + IY H H + +LY +L
Sbjct: 63 EHRDLPIYQSHHHLHHHQVLYQQSPYL 89
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 454 TDTTHDHYKAHGKSHVY 404
T H H HG SH++
Sbjct: 411 TPGPHHHTMGHGHSHIH 427
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,821
Number of Sequences: 438
Number of extensions: 5465
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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