Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1j06
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0072 + 22524974-22525310,22526334-22526552,22526826-225275...    27   9.4  
01_05_0430 + 22078651-22078677,22079269-22079356,22079669-220799...    27   9.4  

>04_04_0072 +
           22524974-22525310,22526334-22526552,22526826-22527532,
           22527664-22528482
          Length = 693

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 184 FLRTWLCRLLRWPSGWSQHNVSPPAS 107
           ++R WL  L R P+ W  H    PAS
Sbjct: 433 YVRRWLPELARLPTEWIHHPWDAPAS 458


>01_05_0430 +
           22078651-22078677,22079269-22079356,22079669-22079929,
           22080693-22080950,22081036-22081160,22082375-22082851,
           22082937-22083848
          Length = 715

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -3

Query: 341 LLIYKSSSLRIYS*INKSRSFLIVVNNEIYVISSGSSRHEVLSG 210
           LLI K     + +  N +++ LI  N E++ +++    HE L+G
Sbjct: 608 LLIEKEVKCFVENAYNNAKNILIKHNKELHALANALLEHETLTG 651


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,687,992
Number of Sequences: 37544
Number of extensions: 288363
Number of successful extensions: 790
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)